Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_J04
         (900 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    24   1.6  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    23   3.8  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    23   3.8  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    23   5.0  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   6.6  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   6.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   6.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   6.6  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 19/59 (32%), Positives = 25/59 (42%)
 Frame = -3

Query: 496 IQPNNCVVQRFPCALLPNYSCFSLVCDSNCYYILWISPQCHQILHCFFYARFNYGQYCI 320
           + PNNC       A + + S ++LV  S      W      +I H FFY    YG Y I
Sbjct: 179 VDPNNC---DNTYAYISDLSGYALVVYS------WAKNDSWRITHNFFYFDPRYGNYNI 228


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 745 DMLPAIWTTCQVPYDPT 695
           D  P IW   +  YDPT
Sbjct: 95  DNKPEIWVLLEAKYDPT 111


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 745 DMLPAIWTTCQVPYDPT 695
           D  P IW   +  YDPT
Sbjct: 95  DNKPEIWVLLEAKYDPT 111


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -2

Query: 575 MALGNFCFLFCLAP 534
           +A+ NF  +FC++P
Sbjct: 94  LAISNFLMMFCMSP 107


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 365 ENLVALGGNPEDIIAVGVT 421
           EN+   GGNP+ I  +G++
Sbjct: 191 ENIEWFGGNPKRITLIGLS 209


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 365 ENLVALGGNPEDIIAVGVT 421
           EN+   GGNP+ I  +G++
Sbjct: 62  ENIEWFGGNPKRITLIGLS 80


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 507 LPLLTSFLTRCQTKQETKIT*SHYVVF 587
           LP+ TS+ +    +QE K + SHY ++
Sbjct: 439 LPVHTSYKSGLNLEQEKKDSISHYHLY 465


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 365 ENLVALGGNPEDIIAVGVT 421
           EN+   GGNP+ I  +G++
Sbjct: 191 ENIEWFGGNPKRITLIGLS 209


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,594
Number of Sequences: 438
Number of extensions: 5951
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)