Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_J02
         (953 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S57284-1|AAB25906.1|  437|Caenorhabditis elegans S-adenosylhomoc...   270   7e-73
M64306-1|AAA28062.1|  437|Caenorhabditis elegans S-adenosylhomoc...   270   7e-73
AF043699-5|AAB97565.1|  437|Caenorhabditis elegans Hypothetical ...   270   7e-73
AC006659-2|AAF39883.2|  977|Caenorhabditis elegans Hypothetical ...    29   3.7  
U50199-6|AAA91266.1|  470|Caenorhabditis elegans Vacuolar h atpa...    29   4.9  

>S57284-1|AAB25906.1|  437|Caenorhabditis elegans
           S-adenosylhomocysteine hydrolase protein.
          Length = 437

 Score =  270 bits (663), Expect = 7e-73
 Identities = 122/164 (74%), Positives = 141/164 (85%)
 Frame = +2

Query: 200 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 379
           KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5   KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64

Query: 380 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 559
           IETL  LGAEVQWSS NI+STQD AAAA+   G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65  IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124

Query: 560 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYK 691
           +PLNMILDDGGDLTNLVH KYP  L  ++G++EETTTGVHNL K
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAK 168


>M64306-1|AAA28062.1|  437|Caenorhabditis elegans
           S-adenosylhomocysteine hydrolase protein.
          Length = 437

 Score =  270 bits (663), Expect = 7e-73
 Identities = 122/164 (74%), Positives = 141/164 (85%)
 Frame = +2

Query: 200 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 379
           KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5   KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64

Query: 380 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 559
           IETL  LGAEVQWSS NI+STQD AAAA+   G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65  IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124

Query: 560 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYK 691
           +PLNMILDDGGDLTNLVH KYP  L  ++G++EETTTGVHNL K
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAK 168


>AF043699-5|AAB97565.1|  437|Caenorhabditis elegans Hypothetical
           protein K02F2.2 protein.
          Length = 437

 Score =  270 bits (663), Expect = 7e-73
 Identities = 122/164 (74%), Positives = 141/164 (85%)
 Frame = +2

Query: 200 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 379
           KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5   KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64

Query: 380 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 559
           IETL  LGAEVQWSS NI+STQD AAAA+   G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65  IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124

Query: 560 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYK 691
           +PLNMILDDGGDLTNLVH KYP  L  ++G++EETTTGVHNL K
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAK 168


>AC006659-2|AAF39883.2|  977|Caenorhabditis elegans Hypothetical
           protein H16O14.1 protein.
          Length = 977

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 463 CSCGLVLCTI-NVTAGPLYLCSQFY*SLNKNRCLYCHV*AAGYSGTFEYFSWSI 305
           C CG+++  I N+TA         Y  +N    L   + + G+   F YF WS+
Sbjct: 442 CECGILIAVIENITALITQFFLMCYLGVNAACALQSLLKSPGWRPGFRYFHWSL 495


>U50199-6|AAA91266.1|  470|Caenorhabditis elegans Vacuolar h atpase
           protein 15 protein.
          Length = 470

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2

Query: 623 PDLLKDVKGITEETTTGVHNL 685
           PDL  DVK +TEE T  VH+L
Sbjct: 316 PDLEDDVKFLTEELTLSVHDL 336


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,312,716
Number of Sequences: 27780
Number of extensions: 347258
Number of successful extensions: 761
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)