Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_J01
         (957 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010015-1|AAQ22484.1|  283|Drosophila melanogaster RE16955p pro...   136   6e-32
AY061029-1|AAL28577.1|  283|Drosophila melanogaster HL05730p pro...   136   6e-32
AE014297-2362|AAF55427.2|  283|Drosophila melanogaster CG5823-PA...   136   6e-32
X92663-1|CAA63351.1|  232|Drosophila melanogaster ubiquitin-conj...    32   1.3  
AY094899-1|AAM11252.1|  232|Drosophila melanogaster RE74673p pro...    32   1.3  
AE014134-1951|AAN10762.1|  232|Drosophila melanogaster CG6720-PB...    32   1.3  
AE014134-1950|AAF53008.1|  232|Drosophila melanogaster CG6720-PA...    32   1.3  

>BT010015-1|AAQ22484.1|  283|Drosophila melanogaster RE16955p
           protein.
          Length = 283

 Score =  136 bits (328), Expect = 6e-32
 Identities = 72/137 (52%), Positives = 80/137 (58%)
 Frame = +1

Query: 256 TRXXQDYLRXKNXXXXXXXXXXXXSNILEWHXRXXRAGXKSLRRGIXSWKXNXSXSEXPX 435
           +R  QDY+R K             +NILEWH    +    S   G           E P 
Sbjct: 17  SRMKQDYMRLKRDPLPYITAEPLPNNILEWHY-CVKGPEDSPYYGGYYHGTLLFPREFPF 75

Query: 436 KPSSIDMITPNGRFKTNTRLCLSIXXFXPDTWNPAWSISTILTGLLSFMLEKTPTLGSIE 615
           KP SI M+TPNGRFKTNTRLCLSI  F PDTWNP W + TILTGLLSFMLE TPTLGSIE
Sbjct: 76  KPPSIYMLTPNGRFKTNTRLCLSISDFHPDTWNPTWCVGTILTGLLSFMLESTPTLGSIE 135

Query: 616 TSEYXKRCLAA*SLKIN 666
           +S Y K+  A  SL  N
Sbjct: 136 SSNYDKQMFAQKSLAFN 152


>AY061029-1|AAL28577.1|  283|Drosophila melanogaster HL05730p
           protein.
          Length = 283

 Score =  136 bits (328), Expect = 6e-32
 Identities = 72/137 (52%), Positives = 80/137 (58%)
 Frame = +1

Query: 256 TRXXQDYLRXKNXXXXXXXXXXXXSNILEWHXRXXRAGXKSLRRGIXSWKXNXSXSEXPX 435
           +R  QDY+R K             +NILEWH    +    S   G           E P 
Sbjct: 17  SRMKQDYMRLKRDPLPYITAEPLPNNILEWHY-CVKGPEDSPYYGGYYHGTLLFPREFPF 75

Query: 436 KPSSIDMITPNGRFKTNTRLCLSIXXFXPDTWNPAWSISTILTGLLSFMLEKTPTLGSIE 615
           KP SI M+TPNGRFKTNTRLCLSI  F PDTWNP W + TILTGLLSFMLE TPTLGSIE
Sbjct: 76  KPPSIYMLTPNGRFKTNTRLCLSISDFHPDTWNPTWCVGTILTGLLSFMLESTPTLGSIE 135

Query: 616 TSEYXKRCLAA*SLKIN 666
           +S Y K+  A  SL  N
Sbjct: 136 SSNYDKQMFAQKSLAFN 152


>AE014297-2362|AAF55427.2|  283|Drosophila melanogaster CG5823-PA
           protein.
          Length = 283

 Score =  136 bits (328), Expect = 6e-32
 Identities = 72/137 (52%), Positives = 80/137 (58%)
 Frame = +1

Query: 256 TRXXQDYLRXKNXXXXXXXXXXXXSNILEWHXRXXRAGXKSLRRGIXSWKXNXSXSEXPX 435
           +R  QDY+R K             +NILEWH    +    S   G           E P 
Sbjct: 17  SRMKQDYMRLKRDPLPYITAEPLPNNILEWHY-CVKGPEDSPYYGGYYHGTLLFPREFPF 75

Query: 436 KPSSIDMITPNGRFKTNTRLCLSIXXFXPDTWNPAWSISTILTGLLSFMLEKTPTLGSIE 615
           KP SI M+TPNGRFKTNTRLCLSI  F PDTWNP W + TILTGLLSFMLE TPTLGSIE
Sbjct: 76  KPPSIYMLTPNGRFKTNTRLCLSISDFHPDTWNPTWCVGTILTGLLSFMLESTPTLGSIE 135

Query: 616 TSEYXKRCLAA*SLKIN 666
           +S Y K+  A  SL  N
Sbjct: 136 SSNYDKQMFAQKSLAFN 152


>X92663-1|CAA63351.1|  232|Drosophila melanogaster
           ubiquitin-conjugating enzyme UbcD2 protein.
          Length = 232

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
 Frame = +1

Query: 424 EXPXKPSSIDMITPNGRFKTNTR--LCLSIXXFXPDTWNPAWSISTILTGLLSFMLE--- 588
           E P KP  +   T       N++  +CL I     D W+PA +IS +L  + S + +   
Sbjct: 144 EYPFKPPKVTFRTRIYHCNINSQGVICLDILK---DNWSPALTISKVLLSICSLLTDCNP 200

Query: 589 KTPTLGSIETSEYXKR 636
             P +GSI T     R
Sbjct: 201 ADPLVGSIATQYLQNR 216


>AY094899-1|AAM11252.1|  232|Drosophila melanogaster RE74673p
           protein.
          Length = 232

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
 Frame = +1

Query: 424 EXPXKPSSIDMITPNGRFKTNTR--LCLSIXXFXPDTWNPAWSISTILTGLLSFMLE--- 588
           E P KP  +   T       N++  +CL I     D W+PA +IS +L  + S + +   
Sbjct: 144 EYPFKPPKVTFRTRIYHCNINSQGVICLDILK---DNWSPALTISKVLLSICSLLTDCNP 200

Query: 589 KTPTLGSIETSEYXKR 636
             P +GSI T     R
Sbjct: 201 ADPLVGSIATQYLQNR 216


>AE014134-1951|AAN10762.1|  232|Drosophila melanogaster CG6720-PB,
           isoform B protein.
          Length = 232

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
 Frame = +1

Query: 424 EXPXKPSSIDMITPNGRFKTNTR--LCLSIXXFXPDTWNPAWSISTILTGLLSFMLE--- 588
           E P KP  +   T       N++  +CL I     D W+PA +IS +L  + S + +   
Sbjct: 144 EYPFKPPKVTFRTRIYHCNINSQGVICLDILK---DNWSPALTISKVLLSICSLLTDCNP 200

Query: 589 KTPTLGSIETSEYXKR 636
             P +GSI T     R
Sbjct: 201 ADPLVGSIATQYLQNR 216


>AE014134-1950|AAF53008.1|  232|Drosophila melanogaster CG6720-PA,
           isoform A protein.
          Length = 232

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
 Frame = +1

Query: 424 EXPXKPSSIDMITPNGRFKTNTR--LCLSIXXFXPDTWNPAWSISTILTGLLSFMLE--- 588
           E P KP  +   T       N++  +CL I     D W+PA +IS +L  + S + +   
Sbjct: 144 EYPFKPPKVTFRTRIYHCNINSQGVICLDILK---DNWSPALTISKVLLSICSLLTDCNP 200

Query: 589 KTPTLGSIETSEYXKR 636
             P +GSI T     R
Sbjct: 201 ADPLVGSIATQYLQNR 216


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,776,391
Number of Sequences: 53049
Number of extensions: 329605
Number of successful extensions: 502
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4771654299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)