Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_I24
         (897 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    31   0.019
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    24   1.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.9  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   5.0  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   6.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   8.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   8.7  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 30.7 bits (66), Expect = 0.019
 Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
 Frame = +2

Query: 197 QPLDIGEHYLVRRSDESWHPA-EIIQSRYSTAESCYEYYVHYVGYDRRLDEWVS---RHR 364
           +P+++ +  +    D   H     I  +   + +C E ++  +GY ++LD WV    + +
Sbjct: 65  RPVEVDDDLIKAIIDSDRHSTTREIAEKLHVSHTCIENHLKQLGYVQKLDTWVPHELKEK 124

Query: 365 VMSDRFDVCE----QSNNNINCDHLLTDKSGRKITRNQKRK 475
            ++ R + C+    ++ N+     L+T      +  N KRK
Sbjct: 125 HLTQRINSCDLLKKRNENDPFLKRLITGDEKWVVYNNIKRK 165


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = +2

Query: 629 YPDEYGKQSKLWLCEYCLKYMRMEKTYRYHLS 724
           + D++ +   L++CE+C +  R + +   H S
Sbjct: 25  FQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKS 56


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 261 RLYSRDTVQRNLVTNIMSIMSDMIEDSTNGCPATGLCQI 377
           R+ SRD   R +V     +  ++I  ++ GC A   C +
Sbjct: 116 RVLSRDVQVRAVVAQAYKVDVEVIGGASRGCTAVLRCVV 154



 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 728 CTARQPQGNEIYRKGTIAI 784
           C+AR  QG+   R G +A+
Sbjct: 589 CSARNKQGHSARRSGDVAV 607


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 261 RLYSRDTVQRNLVTNIMSIMSDMIEDSTNGCPATGLCQI 377
           R+ SRD   R +V     +  ++I  ++ GC A   C +
Sbjct: 116 RVLSRDVQVRAVVAQAYKVDVEVIGGASRGCTAVLRCVV 154



 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 728 CTARQPQGNEIYRKGTIAI 784
           C+AR  QG+   R G +A+
Sbjct: 589 CSARNKQGHSARRSGDVAV 607


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 233 RSDESWHPAEIIQSRYSTAESCYEYYVHYVGY 328
           +++++W P        + A    EYY HYV +
Sbjct: 438 QTNKTWLPVNENYKSLNLAAQKREYYSHYVAF 469


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +1

Query: 571 IHRQDTNWKI*NRYLVF 621
           ++++D+NW I N +++F
Sbjct: 26  LNQEDSNWIITNSFIIF 42


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 419 RSLCYCSTARIRRTY 375
           R LC C   R+RR Y
Sbjct: 403 RILCACCPGRVRRRY 417


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 692 SYTSNSIHITTILIVYHIHQ 633
           SY+S S+ +  +L ++HI Q
Sbjct: 77  SYSSVSLQVANLLRLFHIPQ 96


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 692 SYTSNSIHITTILIVYHIHQ 633
           SY+S S+ +  +L ++HI Q
Sbjct: 167 SYSSVSLQVANLLRLFHIPQ 186


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,131
Number of Sequences: 438
Number of extensions: 5687
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)