Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_I23
(929 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021488-2|CAA16367.2| 378|Caenorhabditis elegans Hypothetical ... 182 3e-46
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr... 32 0.67
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 31 1.6
U21309-6|AAT92086.1| 541|Caenorhabditis elegans Hypothetical pr... 30 2.7
U21309-5|AAT92085.1| 536|Caenorhabditis elegans Hypothetical pr... 30 2.7
U21309-4|AAN73883.1| 546|Caenorhabditis elegans Hypothetical pr... 30 2.7
AY314778-1|AAQ84885.1| 546|Caenorhabditis elegans calcitonin re... 30 2.7
AY314777-1|AAQ84884.1| 541|Caenorhabditis elegans calcitonin re... 30 2.7
AY314776-1|AAQ84883.1| 536|Caenorhabditis elegans calcitonin re... 30 2.7
>AL021488-2|CAA16367.2| 378|Caenorhabditis elegans Hypothetical
protein Y45F10A.4 protein.
Length = 378
Score = 182 bits (443), Expect = 3e-46
Identities = 87/156 (55%), Positives = 116/156 (74%)
Frame = +2
Query: 245 FDPVAHDLEASFRLTRFADLKGRSCKVPQDVLGKLVESLQQDYSQADQDQFMHVAIPRIG 424
FDPV++ L+ F LT+ +KG CKVP++VL +L+++ + D + D+ +
Sbjct: 11 FDPVSNGLDEDFVLTKLTGMKGCGCKVPRNVLLQLLQTFKTDLV-INNDE--------VD 61
Query: 425 IGLDCSVTPLRHGGLCLVQTTDFFYPLVDDPYMMGKIACANVLSDLYAMGVTECDNMLML 604
IGLD V PLRH GL LVQTTDFFYPL+DDPY+MG++ CANVLSDLYAMGV+ECDNMLML
Sbjct: 62 IGLDSCVIPLRHPGLRLVQTTDFFYPLIDDPYIMGRVTCANVLSDLYAMGVSECDNMLML 121
Query: 605 LGVSTKMTEKERDVVIPLIMRGFKDSALEAGTSVTG 712
L V+ + EK+RD+V+PL ++GFKD+A EAGT + G
Sbjct: 122 LAVAIDLNEKQRDIVVPLFIQGFKDAADEAGTKIRG 157
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/51 (60%), Positives = 38/51 (74%)
Frame = +3
Query: 711 GGQTVINPWCTIGGVATTICQPNEYIVPDNAVMGDVLVLTKPLGTQVAVNA 863
GGQTV PW +GGVAT++ +E I D AV GDVL+LTKP+G QVAVN+
Sbjct: 157 GGQTVRCPWLLLGGVATSVAHESEIIKVDQAVPGDVLILTKPIGGQVAVNS 207
>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical
protein ZK154.5 protein.
Length = 1105
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Frame = -3
Query: 360 KDSTSFP--RTS*GTLQLLPFRSANRVSRKLASKSCATGS---NGRRKAIELG 217
KDST + R + GT+ L ++ R+ +++ S C+T S +GR K+ E G
Sbjct: 677 KDSTIYQLKRFTVGTISLTEQKTVERIKQEIPSSECSTASLDGDGREKSFETG 729
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 711 PVTDVPASKAESLNPRIIRGITTSRS-FSVIFVETPNNMSILSHSVTPIAYRSLRTLAH 538
P T +PA + +L P +IR + +++ + TP+ V+ ++R L LAH
Sbjct: 1769 PTTSIPAPQPVALTPEMIRALANAQTPVTASMTNTPSTAQFPVGVVSTPSHRDLSFLAH 1827
>U21309-6|AAT92086.1| 541|Caenorhabditis elegans Hypothetical
protein C13B9.4c protein.
Length = 541
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 374 NSLAVKTQQVFREHLEVLCNFFPLDQQIVSAENLPPNRAP 255
N LA + Q F E ++VL +PL ++++ NL P R P
Sbjct: 28 NVLASTSVQAFNEAMDVLEESYPLCKKMLDHNNLFPERDP 67
>U21309-5|AAT92085.1| 536|Caenorhabditis elegans Hypothetical
protein C13B9.4b protein.
Length = 536
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 374 NSLAVKTQQVFREHLEVLCNFFPLDQQIVSAENLPPNRAP 255
N LA + Q F E ++VL +PL ++++ NL P R P
Sbjct: 28 NVLASTSVQAFNEAMDVLEESYPLCKKMLDHNNLFPERDP 67
>U21309-4|AAN73883.1| 546|Caenorhabditis elegans Hypothetical
protein C13B9.4a protein.
Length = 546
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 374 NSLAVKTQQVFREHLEVLCNFFPLDQQIVSAENLPPNRAP 255
N LA + Q F E ++VL +PL ++++ NL P R P
Sbjct: 28 NVLASTSVQAFNEAMDVLEESYPLCKKMLDHNNLFPERDP 67
>AY314778-1|AAQ84885.1| 546|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1C protein.
Length = 546
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 374 NSLAVKTQQVFREHLEVLCNFFPLDQQIVSAENLPPNRAP 255
N LA + Q F E ++VL +PL ++++ NL P R P
Sbjct: 28 NVLASTSVQAFNEAMDVLEESYPLCKKMLDHNNLFPERDP 67
>AY314777-1|AAQ84884.1| 541|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1B protein.
Length = 541
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 374 NSLAVKTQQVFREHLEVLCNFFPLDQQIVSAENLPPNRAP 255
N LA + Q F E ++VL +PL ++++ NL P R P
Sbjct: 28 NVLASTSVQAFNEAMDVLEESYPLCKKMLDHNNLFPERDP 67
>AY314776-1|AAQ84883.1| 536|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1A protein.
Length = 536
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 374 NSLAVKTQQVFREHLEVLCNFFPLDQQIVSAENLPPNRAP 255
N LA + Q F E ++VL +PL ++++ NL P R P
Sbjct: 28 NVLASTSVQAFNEAMDVLEESYPLCKKMLDHNNLFPERDP 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,590,514
Number of Sequences: 27780
Number of extensions: 477674
Number of successful extensions: 1258
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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