Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_I20
         (935 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965...   128   6e-30
08_02_0586 - 19024584-19024655,19024745-19024855,19024967-190250...    74   2e-13
11_06_0498 - 24344454-24344660,24344840-24344944,24345324-243454...    29   5.3  
06_03_1332 - 29403320-29407804                                         28   9.3  

>04_04_1630 -
           34896021-34896143,34896329-34896403,34896500-34896556,
           34897176-34897352,34897426-34897492,34898043-34898101,
           34898188-34898241,34898455-34898604,34898709-34898918,
           34898980-34899039,34899399-34899527,34899616-34899720,
           34899935-34900024,34900630-34900695,34901047-34901115,
           34901348-34901467,34901572-34901634,34901681-34901817,
           34902070-34902160,34902298-34902463,34902700-34904172,
           34905666-34905940,34906322-34906819,34906996-34907145,
           34907840-34907911,34908006-34908266,34908478-34908558,
           34908745-34908996,34909323-34909382,34909602-34909853,
           34910385-34910549,34910589-34910849,34911267-34912307,
           34913398-34913457,34914055-34914165,34914448-34914534,
           34915227-34915300,34915397-34915490,34915644-34915689,
           34916397-34916521
          Length = 2501

 Score =  128 bits (309), Expect = 6e-30
 Identities = 59/93 (63%), Positives = 68/93 (73%)
 Frame = +1

Query: 274 INLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLL 453
           +N+YPL NYTFGTKEP  EKD SV  RF RM+  + K GMR SVE +LLV EH  PH+LL
Sbjct: 9   VNVYPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 68

Query: 454 LQLGTAFFKLPGGELNPGEDEIDGLKRLLTETL 552
           LQ+G  F KLPGG L PGE+EI+GLKR L   L
Sbjct: 69  LQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKL 101



 Score = 30.7 bits (66), Expect = 1.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 581 WLIEDTIGNWWRPNFEPPQY 640
           W + + +  WWRPNFE   Y
Sbjct: 112 WQVGECVAVWWRPNFETVMY 131


>08_02_0586 -
           19024584-19024655,19024745-19024855,19024967-19025053,
           19025154-19025245,19025456-19025595,19025689-19025867
          Length = 226

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
 Frame = +1

Query: 274 INLYPLTNYTFGTKEPLFEKDAS----VPARFQRMREEFCKIGMRRSVEGVLLVHEHGLP 441
           + +YPL  Y FG ++       +       R  R++  F   G+R SV GVLLV     P
Sbjct: 23  VEIYPLCRYYFGARDVAAGGAGAGLETAADRALRLKANFAAHGLRTSVHGVLLVELFDHP 82

Query: 442 HVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGQA 561
           HVLLLQ+  + F LPGG L PGE ++ GLKR L+  L  A
Sbjct: 83  HVLLLQVRNSSFLLPGGRLRPGEQDVQGLKRKLSTKLSVA 122


>11_06_0498 -
           24344454-24344660,24344840-24344944,24345324-24345407,
           24345523-24345615,24345795-24345920,24347157-24347315,
           24347398-24347475,24348316-24348375,24349433-24349555,
           24349961-24350041
          Length = 371

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 279 INRPIES*IHAWVLAYLMLXAWARRPLFVTGR 184
           I RP++S +  W L+ L L  W   P FV  +
Sbjct: 260 IGRPVKSLLAVWGLSGLKLKTWVEAPSFVRAK 291


>06_03_1332 - 29403320-29407804
          Length = 1494

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +1

Query: 112  RCAHLCIRGFVKNQLKSHLAAVQGPPGNKQWPARPGLQHQISQNPSMNLTLNRSINLYP 288
            RC  +   G +  Q+ + LA+   P GNK   AR GL+ Q  +     ++    + L P
Sbjct: 1166 RCNKIRGLGVLGKQMTTMLASSSSPCGNKLEDARFGLEQQQPRGEDEKVSAEAGLLLLP 1224


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,748,292
Number of Sequences: 37544
Number of extensions: 365886
Number of successful extensions: 969
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)