Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_I18
(921 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.22
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.38
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.38
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.38
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.50
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.50
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.50
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.50
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 1.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 30 2.0
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 30 2.0
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 30 2.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.7
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 30 2.7
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 3.5
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 29 3.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 3.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 4.7
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 4.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 6.2
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 6.2
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 6.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 24 6.6
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 8.2
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 28 8.2
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +3
Query: 429 GXXXXXGGPPPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGGG 563
G GGPPP GG PP P PPP GG
Sbjct: 1565 GMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGG 1609
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.38
Identities = 24/79 (30%), Positives = 24/79 (30%)
Frame = +3
Query: 450 GPPPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGGGGGXXKKXXXXXXXXXXXXXXXX 629
G PP GG PPPP P PPP GG
Sbjct: 718 GLPPITGGPPPPPPPGG--LPPITGGPPPPPPP----GGLPPISGGPPPPPPPPGGCPPP 771
Query: 630 TXPPPPXXXXXXPXXPPPP 686
PPPP P PPPP
Sbjct: 772 PPPPPPGGFKGGPPPPPPP 790
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPPP PPPP PPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPPP PPPP PPPPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 447 GGPPPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGG 560
GG PP GG PPPP P PPP GG
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPP---PPPPPGGFKGG 783
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPPP PPP PPPPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPP PPPP PPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.38
Identities = 24/79 (30%), Positives = 24/79 (30%)
Frame = +3
Query: 450 GPPPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGGGGGXXKKXXXXXXXXXXXXXXXX 629
G PP GG PPPP P PPP GG
Sbjct: 718 GLPPITGGPPPPPPPGG--LPPITGGPPPPPPP----GGLPPISGGPPPPPPPPGGCPPP 771
Query: 630 TXPPPPXXXXXXPXXPPPP 686
PPPP P PPPP
Sbjct: 772 PPPPPPGGFKGGPPPPPPP 790
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPPP PPPP PPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPPP PPPP PPPPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 447 GGPPPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGG 560
GG PP GG PPPP P PPP GG
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPP---PPPPPGGFKGG 783
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPPP PPP PPPPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPP PPPP PPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.38
Identities = 24/79 (30%), Positives = 24/79 (30%)
Frame = +3
Query: 450 GPPPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGGGGGXXKKXXXXXXXXXXXXXXXX 629
G PP GG PPPP P PPP GG
Sbjct: 301 GLPPITGGPPPPPPPGG--LPPITGGPPPPPPP----GGLPPISGGPPPPPPPPGGCPPP 354
Query: 630 TXPPPPXXXXXXPXXPPPP 686
PPPP P PPPP
Sbjct: 355 PPPPPPGGFKGGPPPPPPP 373
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPPP PPPP PPPPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPPP PPPP PPPPP
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 447 GGPPPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGG 560
GG PP GG PPPP P PPP GG
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPP---PPPPPGGFKGG 366
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPPP PPP PPPPP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPP PPPP PPPPP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 453 PPPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGGGGG 569
PPP GG PPPP + + PPP GGGG
Sbjct: 772 PPPRGGMHHMPPPPSFRGG-RGGHGGPPPPHFDRRGGGG 809
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 450 GPPPXGGGGXXPPPPXXKKKPQXXFFXPPP 539
G PP G G PPPP P PPP
Sbjct: 245 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 274
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/83 (26%), Positives = 24/83 (28%), Gaps = 3/83 (3%)
Frame = +3
Query: 447 GGPPPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGGGGGXXKKXXXXXXXXXXXXXXX 626
G PPP G PPP P PPP GG +
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP---PAGGSPPPPRAGSPPPPPPPRGSPPT 309
Query: 627 XTXPPPPXXXXXXP---XXPPPP 686
+ PPP P PPPP
Sbjct: 310 GSLPPPQAGGSPPPAGTGSPPPP 332
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 447 GGPPPXGGGGXXPPPPXXKKK 509
GG PP G G PPPP K++
Sbjct: 318 GGSPPPAGTGSPPPPPRQKRQ 338
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 447 GGPPPXGGGGXXPPPPXXKKKPQ 515
G PPP G G PPP ++ P+
Sbjct: 319 GSPPPAGTGSPPPPPRQKRQAPE 341
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 447 GGPPPXGGGGXXPPPPXXKKKPQXXFFXPPP 539
G PP G G PPP P PPP
Sbjct: 245 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 275
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 450 GPPPXGGGGXXPPPPXXKKKPQXXFFXPPP 539
G PP G G PPPP P PPP
Sbjct: 266 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 295
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/83 (26%), Positives = 24/83 (28%), Gaps = 3/83 (3%)
Frame = +3
Query: 447 GGPPPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGGGGGXXKKXXXXXXXXXXXXXXX 626
G PPP G PPP P PPP GG +
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP---PAGGSPPPPRAGSPPPPPPPRGSPPT 330
Query: 627 XTXPPPPXXXXXXP---XXPPPP 686
+ PPP P PPPP
Sbjct: 331 GSLPPPQAGGSPPPAGTGSPPPP 353
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 447 GGPPPXGGGGXXPPPPXXKKK 509
GG PP G G PPPP K++
Sbjct: 339 GGSPPPAGTGSPPPPPRQKRQ 359
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 447 GGPPPXGGGGXXPPPPXXKKKPQ 515
G PPP G G PPP ++ P+
Sbjct: 340 GSPPPAGTGSPPPPPRQKRQAPE 362
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 447 GGPPPXGGGGXXPPPPXXKKKPQXXFFXPPP 539
G PP G G PPP P PPP
Sbjct: 266 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 296
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.50
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 450 GPPPXGGGGXXPPPPXXKKKPQXXFFXPPP 539
G PP G G PPPP P PPP
Sbjct: 251 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 280
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/83 (26%), Positives = 24/83 (28%), Gaps = 3/83 (3%)
Frame = +3
Query: 447 GGPPPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGGGGGXXKKXXXXXXXXXXXXXXX 626
G PPP G PPP P PPP GG +
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP---PAGGSPPPPRAGSPPPPPPPRGSPPT 315
Query: 627 XTXPPPPXXXXXXP---XXPPPP 686
+ PPP P PPPP
Sbjct: 316 GSLPPPQAGGSPPPAGTGSPPPP 338
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 447 GGPPPXGGGGXXPPPPXXKKK 509
GG PP G G PPPP K++
Sbjct: 324 GGSPPPAGTGSPPPPPRQKRQ 344
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 447 GGPPPXGGGGXXPPPPXXKKKPQ 515
G PPP G G PPP ++ P+
Sbjct: 325 GSPPPAGTGSPPPPPRQKRQAPE 347
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 447 GGPPPXGGGGXXPPPPXXKKKPQXXFFXPPP 539
G PP G G PPP P PPP
Sbjct: 251 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 281
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPPP FF PP PPPPP
Sbjct: 725 PPPPPQFFPMIGGPPLMHPTFSTSAPPPPP 754
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +3
Query: 450 GPPPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGGGGGXXKKXXXXXXXXXXXXXXXX 629
GPP G GG PPPP + P PPP G G
Sbjct: 326 GPP--GMGGMPPPPPPGMRYPGG--MPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMI 381
Query: 630 TXPPPP 647
PPPP
Sbjct: 382 PPPPPP 387
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Frame = +3
Query: 453 PPPXGGGGXXPPPPXXKKKP--QXXFFXPPPXXXXXGGGGGXXKKXXXXXXXXXXXXXXX 626
P P G G PPPP + P PPP GG
Sbjct: 308 PGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 367
Query: 627 XTXPP-PPXXXXXXPXXPPP 683
+ PP PP P PPP
Sbjct: 368 PSRPPAPPSGHGMIPPPPPP 387
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/80 (27%), Positives = 23/80 (28%), Gaps = 2/80 (2%)
Frame = +3
Query: 453 PPPXGGGGXXPPPPXXKKKPQXXFF--XPPPXXXXXGGGGGXXKKXXXXXXXXXXXXXXX 626
PPP G PPPP + P PPP G G
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG--GMPPPPPPGMRYPGG 346
Query: 627 XTXPPPPXXXXXXPXXPPPP 686
PPPP P PPP
Sbjct: 347 MPPPPPPRYPSAGPGMYPPP 366
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
Frame = +2
Query: 599 PPPPXFF----FXXXXXPPPPXXXXXXXXPPPPP 688
PPPP F PPPP PPPPP
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 352
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/78 (26%), Positives = 21/78 (26%)
Frame = +3
Query: 453 PPPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGGGGGXXKKXXXXXXXXXXXXXXXXT 632
PPP G PPPP PPP G G
Sbjct: 287 PPPPPSSGMWPPPP------------PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 334
Query: 633 XPPPPXXXXXXPXXPPPP 686
PPPP PPPP
Sbjct: 335 PPPPPGMRYPGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +3
Query: 450 GPPPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGGGGGXXKKXXXXXXXXXXXXXXXX 629
GPP G GG PPPP + P PPP G G
Sbjct: 336 GPP--GMGGMPPPPPPGMRYPGG--MPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMI 391
Query: 630 TXPPPP 647
PPPP
Sbjct: 392 PPPPPP 397
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Frame = +3
Query: 453 PPPXGGGGXXPPPPXXKKKP--QXXFFXPPPXXXXXGGGGGXXKKXXXXXXXXXXXXXXX 626
P P G G PPPP + P PPP GG
Sbjct: 318 PGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 377
Query: 627 XTXPP-PPXXXXXXPXXPPP 683
+ PP PP P PPP
Sbjct: 378 PSRPPAPPSGHGMIPPPPPP 397
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/80 (27%), Positives = 23/80 (28%), Gaps = 2/80 (2%)
Frame = +3
Query: 453 PPPXGGGGXXPPPPXXKKKPQXXFF--XPPPXXXXXGGGGGXXKKXXXXXXXXXXXXXXX 626
PPP G PPPP + P PPP G G
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG--GMPPPPPPGMRYPGG 356
Query: 627 XTXPPPPXXXXXXPXXPPPP 686
PPPP P PPP
Sbjct: 357 MPPPPPPRYPSAGPGMYPPP 376
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
Frame = +2
Query: 599 PPPPXFF----FXXXXXPPPPXXXXXXXXPPPPP 688
PPPP F PPPP PPPPP
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 362
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/78 (26%), Positives = 21/78 (26%)
Frame = +3
Query: 453 PPPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGGGGGXXKKXXXXXXXXXXXXXXXXT 632
PPP G PPPP PPP G G
Sbjct: 297 PPPPPSSGMWPPPP------------PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 344
Query: 633 XPPPPXXXXXXPXXPPPP 686
PPPP PPPP
Sbjct: 345 PPPPPGMRYPGGMPPPPP 362
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPPP PPPP PPPP
Sbjct: 72 PPPPLISILQQAPPPPPPPPPPTLKAPPPP 101
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Frame = +2
Query: 599 PPPPXF--FFXXXXXPPPPXXXXXXXXPPPPP 688
PPPP PPPP PPPPP
Sbjct: 71 PPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = +3
Query: 453 PPPXGGGGXXPPPPXXK--KKPQXXFFXPPPXXXXXGGG 563
PPP GG PPPP P F PPP G G
Sbjct: 86 PPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLG 124
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 453 PPPXGGGGXXPPPP 494
PPP G GG PPPP
Sbjct: 75 PPPPGPGGIPPPPP 88
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 602 PPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPP F PPPP PPPPP
Sbjct: 84 PPPPPMFAGGIPPPPP---MMGGIPPPPP 109
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 686 GGGGXXXXXXXXXGGGGXXXXKKKKXGGGXXKKKXFFXXPPPPPXP 549
GGGG GGGG GGG PPPPP P
Sbjct: 267 GGGGGYAGGGG--GGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPP 310
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -2
Query: 683 GGGXXXXXXXXXGGGGXXXXKKKKXGGGXXKKKXFFXXPPPPPXP 549
GGG GGG GGG PPPPP P
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPP 311
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 686 GGGGXXXXXXXXXGGGGXXXXKKKKXGGGXXKKKXFFXXPPPPPXP 549
GGGG GGGG GGG PPPPP P
Sbjct: 267 GGGGGYAGGGG--GGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPP 310
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -2
Query: 683 GGGXXXXXXXXXGGGGXXXXKKKKXGGGXXKKKXFFXXPPPPPXP 549
GGG GGG GGG PPPPP P
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPP 311
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/76 (28%), Positives = 25/76 (32%)
Frame = +3
Query: 456 PPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGGGGGXXKKXXXXXXXXXXXXXXXXTX 635
PP GG G PPP + Q + PPP G GG +
Sbjct: 673 PPGGGQGPPPPP-----QGQQYYGGPPPPGQPYGPPGGYPPQ-----QQRPPYQAQPYPG 722
Query: 636 PPPPXXXXXXPXXPPP 683
PPPP PPP
Sbjct: 723 PPPPQQQRGYGYPPPP 738
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 9/50 (18%)
Frame = +3
Query: 447 GGPPPXGGG-------GXXPPPPXXKKKPQXXFFXP--PPXXXXXGGGGG 569
G PPP G G PPPP + +PQ P PP GG GG
Sbjct: 733 GYPPPPQPGHPYQQPYGQMPPPPHGQYQPQQQQGGPMGPPGGHHEGGDGG 782
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/76 (28%), Positives = 25/76 (32%)
Frame = +3
Query: 456 PPXGGGGXXPPPPXXKKKPQXXFFXPPPXXXXXGGGGGXXKKXXXXXXXXXXXXXXXXTX 635
PP GG G PPP + Q + PPP G GG +
Sbjct: 673 PPGGGQGPPPPP-----QGQQYYGGPPPPGQPYGPPGGYPPQ-----QQRPPYQAQPYPG 722
Query: 636 PPPPXXXXXXPXXPPP 683
PPPP PPP
Sbjct: 723 PPPPQQQRGYGYPPPP 738
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 9/50 (18%)
Frame = +3
Query: 447 GGPPPXGGG-------GXXPPPPXXKKKPQXXFFXP--PPXXXXXGGGGG 569
G PPP G G PPPP + +PQ P PP GG GG
Sbjct: 733 GYPPPPQPGHPYQQPYGQMPPPPHGQYQPQQQQGGPMGPPGGHHEGGDGG 782
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +3
Query: 453 PPPXGGG-GXXPPPPXXKKKPQXXFFXPPPXXXXXGG 560
PPP G G G PPPP +P + PPP G
Sbjct: 41 PPPVGAGVGYAPPPP----RPYGATYAPPPPMGIGAG 73
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +2
Query: 599 PP--PPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PP PP F PPPP PPPPP
Sbjct: 48 PPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Frame = +2
Query: 599 PPPPXFFFXXXXXP--PPPXXXXXXXXPP--PPP 688
PPPP +FF P PPP PP PPP
Sbjct: 24 PPPPDWFFPGPLRPWGPPPPWHRNRGPPPFGPPP 57
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = +3
Query: 429 GXXXXXGGPP--PXGGGGXXPP-PPXXKKKPQXXFFXPP 536
G GGPP P GGGG P PP K P PP
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPP 657
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = -2
Query: 686 GGGGXXXXXXXXXGGGGXXXXKKKKXGGGXXKKKXFFXXPPPPPXP-XXXGGGXKKXXL 513
GG G GGGG GGG + PPPP P G G KK L
Sbjct: 26 GGAGGCGGGGGCGGGGGCGGGCGYGGGGGCGYGGGYGCGIPPPPPPPPQCGCGRKKRSL 84
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = +3
Query: 429 GXXXXXGGPP--PXGGGGXXPP-PPXXKKKPQXXFFXPP 536
G GGPP P GGGG P PP K P PP
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPP 657
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -3
Query: 685 GGGGXXGXXXXXXGGGGXVXXKKKXRGGGXXKKKXFFXXPPPP 557
GGGG G GGGG GGG PPPP
Sbjct: 74 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = -2
Query: 686 GGGGXXXXXXXXXGGGGXXXXKKKKXGGGXXKKKXFFXXPPPPPXPXXXGG 534
GGGG GGGG GGG PPPP P GG
Sbjct: 75 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGG----GCAPPPPPPACGGG 121
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPPP PPPP PPPPP
Sbjct: 243 PPPPS---PVCMPPPPPPCPMPIPCPPPPP 269
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 453 PPPXGGGGXXPPPPXXKKKP 512
PPP G GG PPPP P
Sbjct: 664 PPPGGLGGFMPPPPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 453 PPPXGGGGXXPPPPXXKKKP 512
PPP G GG PPPP P
Sbjct: 664 PPPGGLGGFMPPPPPPPPMP 683
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PP P PPPP PPPPP
Sbjct: 566 PPLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPPP PPPP PPPP
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 599 PPPPXFFFXXXXXPPPPXXXXXXXXPPPPP 688
PPP PPPP PPPPP
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 453 PPPXGGGGXXPPPP 494
PPP GGG PPPP
Sbjct: 44 PPPCGGGYEAPPPP 57
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = -2
Query: 680 GGXXXXXXXXXGGGGXXXXKKK--KXGGGXXKKKXFFXXPPPPPXPXXXGGG 531
GG GGG GGG PPPPP P GGG
Sbjct: 25 GGCCPPSQPSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGG 76
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = -2
Query: 680 GGXXXXXXXXXGGGGXXXXKKK--KXGGGXXKKKXFFXXPPPPPXPXXXGGG 531
GG GGG GGG PPPPP P GGG
Sbjct: 25 GGCCPPSQPSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGG 76
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 23.8 bits (49), Expect(2) = 6.6
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +3
Query: 456 PPXGGGGXXPPPPXXKKKPQXXFFXPPP 539
P G PPPP +K + PPP
Sbjct: 113 PQHGDHEASPPPPPPPRKSRAGGSSPPP 140
Score = 23.0 bits (47), Expect(2) = 6.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 636 PPPPXXXXXXPXXPPPP 686
PPPP P PPP
Sbjct: 141 PPPPRVPRTPPPRSPPP 157
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +2
Query: 638 PPPPXXXXXXXXPPPPPXXXXXXXXXXXXXXXXXXXXXXXPPPXXXFFFF 787
PPPP PPPPP PPP F F
Sbjct: 540 PPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPPSFMF 589
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 450 GPPPXGGGGXXPPPP 494
GPP G GG PPPP
Sbjct: 424 GPPQGGPGGFGPPPP 438
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 3/58 (5%)
Frame = -2
Query: 686 GGGGXXXXXXXXXGGGGXXXXKKKKXGGGXXKKKXFFXXPPPPPXPXXXG---GGXKK 522
GGGG GGGG PPPPP P G GG KK
Sbjct: 24 GGGGCGGGCGGGCGGGGGGGCLPTLGCSVISFNVPTLKLPPPPPPPCGGGCGCGGRKK 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,973,467
Number of Sequences: 27780
Number of extensions: 287515
Number of successful extensions: 2687
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1760
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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