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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_I17
         (1119 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    29   0.081
AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical ...    35   0.12 
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    34   0.21 
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    34   0.21 
AF068713-14|AAK73895.1|  172|Caenorhabditis elegans Ground-like ...    34   0.21 
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    34   0.21 
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    33   0.28 
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    33   0.28 
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    33   0.48 
AL110485-8|CAB60356.1|  434|Caenorhabditis elegans Hypothetical ...    28   1.1  
AL132898-7|CAC14410.1|  413|Caenorhabditis elegans Hypothetical ...    31   1.1  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    31   1.5  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    31   1.5  
U00058-3|AAD31933.1|  162|Caenorhabditis elegans Ground-like (gr...    31   1.5  
AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    31   2.0  
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    31   2.0  
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    31   2.0  
AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    30   3.4  
U50310-5|AAA92541.1|  318|Caenorhabditis elegans Ground-like (gr...    29   4.5  
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr...    26   4.9  
Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical pr...    26   4.9  
Z81125-3|CAB03384.1|  790|Caenorhabditis elegans Hypothetical pr...    29   6.0  
AC024790-2|AAF60638.1|  220|Caenorhabditis elegans Ground-like (...    24   7.3  
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    29   7.9  
L25598-3|AAM15551.1|  759|Caenorhabditis elegans Calpain family ...    25   8.5  

>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 28.7 bits (61), Expect(2) = 0.081
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = +1

Query: 577 GGGGGXGGGXXXXXXXXXXXXPPPXXXGGGGXXXXXG 687
           GGGGG GGG            PP    G GG     G
Sbjct: 37  GGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCG 73



 Score = 28.7 bits (61), Expect = 7.9
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = +1

Query: 577 GGGGGXGGGXXXXXXXXXXXXPPPXXXGGGGXXXXXG 687
           GGGGG GGG            PP    G GG     G
Sbjct: 94  GGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCG 130



 Score = 26.2 bits (55), Expect(2) = 5.4
 Identities = 18/64 (28%), Positives = 18/64 (28%)
 Frame = -2

Query: 647 GGGXXXXXXXXXXXXPPPXPPPPPXGXGXKKKKKKXXXXGXGXXXXXXXXXXFWGGGQXX 468
           GGG            PPP PP    G G           G G            GGG   
Sbjct: 96  GGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGG 155

Query: 467 XGGG 456
            GGG
Sbjct: 156 CGGG 159



 Score = 25.8 bits (54), Expect(2) = 1.9
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = +1

Query: 577 GGGGGXGGGXXXXXXXXXXXXPPPXXXGGGGXXXXXG 687
           GGG G GGG            PPP     GG     G
Sbjct: 33  GGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 69



 Score = 25.4 bits (53), Expect(2) = 0.081
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +1

Query: 571 PXGGGGGXGGG 603
           P GGGGG GGG
Sbjct: 21  PSGGGGGGGGG 31



 Score = 23.4 bits (48), Expect(2) = 1.9
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +1

Query: 550 FFFFXPXPXGGGGGXGGG 603
           F F      GGGGG GGG
Sbjct: 18  FLFPSGGGGGGGGGCGGG 35



 Score = 21.4 bits (43), Expect(2) = 5.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 668 PPPPXXXGGG 639
           PPPP   GGG
Sbjct: 55  PPPPPACGGG 64


>AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.9 protein.
          Length = 315

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 16/37 (43%), Positives = 16/37 (43%)
 Frame = +1

Query: 559 FXPXPXGGGGGXGGGXXXXXXXXXXXXPPPXXXGGGG 669
           F P   GGG G GGG            PPP   GGGG
Sbjct: 186 FGPGGGGGGMGGGGGSGGSGGGSGRFPPPPPPYGGGG 222


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 5/44 (11%)
 Frame = -2

Query: 686 PXXXXXPPPPXXXGG-----GXXXXXXXXXXXXPPPXPPPPPXG 570
           P     PPPP   GG     G            PPP PPPPP G
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 5/44 (11%)
 Frame = -2

Query: 686 PXXXXXPPPPXXXGG-----GXXXXXXXXXXXXPPPXPPPPPXG 570
           P     PPPP   GG     G            PPP PPPPP G
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779


>AF068713-14|AAK73895.1|  172|Caenorhabditis elegans Ground-like
           (grd related) protein29 protein.
          Length = 172

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -2

Query: 647 GGGXXXXXXXXXXXXPPPXPPPPPXGXGXKKK 552
           GGG            PPP PPPP  G G KK+
Sbjct: 51  GGGGCGYGGGYGCGIPPPPPPPPQCGCGRKKR 82


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 5/44 (11%)
 Frame = -2

Query: 686 PXXXXXPPPPXXXGG-----GXXXXXXXXXXXXPPPXPPPPPXG 570
           P     PPPP   GG     G            PPP PPPPP G
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 16/39 (41%), Positives = 16/39 (41%)
 Frame = +1

Query: 550 FFFFXPXPXGGGGGXGGGXXXXXXXXXXXXPPPXXXGGG 666
           F F      GGGGG GGG            PPP   GGG
Sbjct: 20  FLFPSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGG 58



 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = +1

Query: 565 PXPXGGGGGXGGGXXXXXXXXXXXXPPPXXXGGG 666
           P P GGG G GGG            PPP   GGG
Sbjct: 52  PAPCGGGCGGGGG---GCGGGGGCAPPPAPCGGG 82


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 16/39 (41%), Positives = 16/39 (41%)
 Frame = +1

Query: 550 FFFFXPXPXGGGGGXGGGXXXXXXXXXXXXPPPXXXGGG 666
           F F      GGGGG GGG            PPP   GGG
Sbjct: 20  FLFPSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGG 58



 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = +1

Query: 565 PXPXGGGGGXGGGXXXXXXXXXXXXPPPXXXGGG 666
           P P GGG G GGG            PPP   GGG
Sbjct: 52  PAPCGGGCGGGGG---GCGGGGGCAPPPAPCGGG 82


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 6/47 (12%)
 Frame = -2

Query: 686 PXXXXXPPPPXXXGGGXXXXXXXXXXXXPPPX------PPPPPXGXG 564
           P     PPPP    GG            PPP       PPPPP G G
Sbjct: 78  PGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLG 124


>AL110485-8|CAB60356.1|  434|Caenorhabditis elegans Hypothetical
           protein Y46G5A.13 protein.
          Length = 434

 Score = 27.9 bits (59), Expect(2) = 1.1
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +1

Query: 580 GGGGXGGGXXXXXXXXXXXXPPPXXXGGGG 669
           GGGG  GG            PPP   GG G
Sbjct: 355 GGGGGSGGPGNSQFSNFNQRPPPSGNGGSG 384



 Score = 22.2 bits (45), Expect(2) = 1.1
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = +1

Query: 373 PPXXKKXGGGXEKNXXFFFGXKKXGGGXPPP 465
           P      GGG   N  + +G    GGG   P
Sbjct: 333 PSERGSGGGGGSGNYGYGYGNSGGGGGSGGP 363


>AL132898-7|CAC14410.1|  413|Caenorhabditis elegans Hypothetical
           protein Y59A8B.10 protein.
          Length = 413

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 16/43 (37%), Positives = 16/43 (37%)
 Frame = +1

Query: 571 PXGGGGGXGGGXXXXXXXXXXXXPPPXXXGGGGXXXXXGXXXF 699
           P GGGGG GGG            P     GGGG     G   F
Sbjct: 236 PSGGGGGGGGGGQSNNNSSFSSVPAFNGGGGGGGGMNVGAAGF 278


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 15/35 (42%), Positives = 15/35 (42%)
 Frame = -2

Query: 668 PPPPXXXGGGXXXXXXXXXXXXPPPXPPPPPXGXG 564
           PPPP   G              PPP PPPPP G G
Sbjct: 633 PPPPPPMG------LPAVGAGAPPPPPPPPPSGAG 661



 Score = 29.5 bits (63), Expect = 4.5
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = -2

Query: 668 PPPPXXXGGGXXXXXXXXXXXXPPPXPPPPPXG 570
           PPPP     G            PPP PPPPP G
Sbjct: 612 PPPPPPQSFGMAPISSAA----PPPPPPPPPMG 640


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 15/35 (42%), Positives = 15/35 (42%)
 Frame = -2

Query: 668 PPPPXXXGGGXXXXXXXXXXXXPPPXPPPPPXGXG 564
           PPPP   G              PPP PPPPP G G
Sbjct: 459 PPPPPPMG------LPAVGAGAPPPPPPPPPSGAG 487



 Score = 29.5 bits (63), Expect = 4.5
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = -2

Query: 668 PPPPXXXGGGXXXXXXXXXXXXPPPXPPPPPXG 570
           PPPP     G            PPP PPPPP G
Sbjct: 438 PPPPPPQSFGMAPISSAA----PPPPPPPPPMG 466


>U00058-3|AAD31933.1|  162|Caenorhabditis elegans Ground-like (grd
           related) protein22 protein.
          Length = 162

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 602 PPPXPPPPPXGXGXKKKKK 546
           PPP PPPP  G G  +KK+
Sbjct: 53  PPPPPPPPMCGCGCGRKKR 71


>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform b protein.
          Length = 518

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 27/115 (23%), Positives = 30/115 (26%), Gaps = 3/115 (2%)
 Frame = -2

Query: 686 PXXXXXPPPPXXXGGGXXXXXXXXXXXXPPPXPPPPPXGXG---XKKKKKKXXXXGXGXX 516
           P      PPP    G             P   PPPPP G      +           G  
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307

Query: 515 XXXXXXXXFWGGGQXXXGGGXPPPFFXXPKKKXXFFSXPPPXFXFXGGGXPKXXP 351
                     GG     G G PPP    P++K       PP      G  P   P
Sbjct: 308 PTGSLPPPQAGGSPPPAGTGSPPP---PPRQKRQAPERSPPTGSPPTGSPPTGRP 359


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform c protein.
          Length = 539

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 27/115 (23%), Positives = 30/115 (26%), Gaps = 3/115 (2%)
 Frame = -2

Query: 686 PXXXXXPPPPXXXGGGXXXXXXXXXXXXPPPXPPPPPXGXG---XKKKKKKXXXXGXGXX 516
           P      PPP    G             P   PPPPP G      +           G  
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328

Query: 515 XXXXXXXXFWGGGQXXXGGGXPPPFFXXPKKKXXFFSXPPPXFXFXGGGXPKXXP 351
                     GG     G G PPP    P++K       PP      G  P   P
Sbjct: 329 PTGSLPPPQAGGSPPPAGTGSPPP---PPRQKRQAPERSPPTGSPPTGSPPTGRP 380


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform a protein.
          Length = 524

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 27/115 (23%), Positives = 30/115 (26%), Gaps = 3/115 (2%)
 Frame = -2

Query: 686 PXXXXXPPPPXXXGGGXXXXXXXXXXXXPPPXPPPPPXGXG---XKKKKKKXXXXGXGXX 516
           P      PPP    G             P   PPPPP G      +           G  
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313

Query: 515 XXXXXXXXFWGGGQXXXGGGXPPPFFXXPKKKXXFFSXPPPXFXFXGGGXPKXXP 351
                     GG     G G PPP    P++K       PP      G  P   P
Sbjct: 314 PTGSLPPPQAGGSPPPAGTGSPPP---PPRQKRQAPERSPPTGSPPTGSPPTGRP 365


>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
            protein D1007.7 protein.
          Length = 988

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 29/112 (25%), Positives = 30/112 (26%)
 Frame = -2

Query: 686  PXXXXXPPPPXXXGGGXXXXXXXXXXXXPPPXPPPPPXGXGXKKKKKKXXXXGXGXXXXX 507
            P     PP P   G G             P  PPPP    G           G G     
Sbjct: 710  PGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPF-GRGAGPMS 768

Query: 506  XXXXXFWGGGQXXXGGGXPPPFFXXPKKKXXFFSXPPPXFXFXGGGXPKXXP 351
                   GG         PPP F   +        PPP F   GGG P   P
Sbjct: 769  SFPPPPRGGMHHMP----PPPSFRGGRGGHG--GPPPPHFDRRGGGGPPFRP 814


>U50310-5|AAA92541.1|  318|Caenorhabditis elegans Ground-like (grd
           related) protein 9 protein.
          Length = 318

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = -2

Query: 668 PPPPXXXGGGXXXXXXXXXXXXPPPXPPPPP 576
           PPP      G            PPP PPPPP
Sbjct: 118 PPPVQYQNQGPQYIEAPPPPPSPPPPPPPPP 148


>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
           protein C33B4.3a protein.
          Length = 1110

 Score = 26.2 bits (55), Expect(2) = 4.9
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 602 PPPXPPPPP 576
           PPP PPPPP
Sbjct: 765 PPPPPPPPP 773



 Score = 21.4 bits (43), Expect(2) = 4.9
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 596 PXPPPPPXGXG 564
           P PPPPP   G
Sbjct: 808 PPPPPPPPPGG 818


>Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical
           protein C33B4.3b protein.
          Length = 993

 Score = 26.2 bits (55), Expect(2) = 4.9
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 602 PPPXPPPPP 576
           PPP PPPPP
Sbjct: 765 PPPPPPPPP 773



 Score = 21.4 bits (43), Expect(2) = 4.9
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 596 PXPPPPPXGXG 564
           P PPPPP   G
Sbjct: 808 PPPPPPPPPGG 818


>Z81125-3|CAB03384.1|  790|Caenorhabditis elegans Hypothetical
           protein T22A3.5 protein.
          Length = 790

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
 Frame = -2

Query: 668 PPPPXXXG--GGXXXXXXXXXXXXPPPXPPPPPXGXGXKKKKK 546
           PPPP      GG            PPP PPP P   G    K+
Sbjct: 726 PPPPQFFPMIGGPPLMHPTFSTSAPPPPPPPQPMEYGYNPMKQ 768


>AC024790-2|AAF60638.1|  220|Caenorhabditis elegans Ground-like (grd
           related) protein 5 protein.
          Length = 220

 Score = 24.2 bits (50), Expect(2) = 7.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 599 PPXPPPPPXGXG 564
           PP PPP P G G
Sbjct: 34  PPPPPPSPCGGG 45



 Score = 23.0 bits (47), Expect(2) = 7.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 602 PPPXPPPPP 576
           PP  PPPPP
Sbjct: 30  PPACPPPPP 38


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
 Frame = -2

Query: 686 PXXXXXPPP-PXXXGGGXXXXXXXXXXXXPPPXPPPPPXG 570
           P     PPP P    G              PP PPPPP G
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598


>L25598-3|AAM15551.1|  759|Caenorhabditis elegans Calpain family
           protein 1, isoform d protein.
          Length = 759

 Score = 25.0 bits (52), Expect(2) = 8.5
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 556 FFXPXPXGGGGGXGGG 603
           FF     GGGGG GGG
Sbjct: 50  FFGGGGGGGGGGGGGG 65



 Score = 21.8 bits (44), Expect(2) = 8.5
 Identities = 12/37 (32%), Positives = 12/37 (32%)
 Frame = +1

Query: 577 GGGGGXGGGXXXXXXXXXXXXPPPXXXGGGGXXXXXG 687
           GGGGG  GG                  GGGG     G
Sbjct: 74  GGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGG 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,641,138
Number of Sequences: 27780
Number of extensions: 283831
Number of successful extensions: 2996
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2243
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3015558362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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