Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_I16
         (1106 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p pro...    26   9.3  
BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p pro...    26   9.3  
U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino pro...    26   9.4  

>BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p
           protein.
          Length = 1286

 Score = 25.8 bits (54), Expect(2) = 9.3
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 554 PPPXPPPXXXXNQXXPP 604
           PPP PPP    N   PP
Sbjct: 732 PPPPPPPPPMANYGAPP 748



 Score = 21.8 bits (44), Expect(2) = 9.3
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 539 PXXXXPPPXPPP 574
           P    PPP PPP
Sbjct: 723 PAFVAPPPPPPP 734


>BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p
           protein.
          Length = 1153

 Score = 25.8 bits (54), Expect(2) = 9.3
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 554 PPPXPPPXXXXNQXXPP 604
           PPP PPP    N   PP
Sbjct: 599 PPPPPPPPPMANYGAPP 615



 Score = 21.8 bits (44), Expect(2) = 9.3
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 539 PXXXXPPPXPPP 574
           P    PPP PPP
Sbjct: 590 PAFVAPPPPPPP 601


>U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino
           protein.
          Length = 1058

 Score = 25.8 bits (54), Expect(2) = 9.4
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 554 PPPXPPPXXXXNQXXPP 604
           PPP PPP    N   PP
Sbjct: 504 PPPPPPPPPLANYGAPP 520



 Score = 21.8 bits (44), Expect(2) = 9.4
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 539 PXXXXPPPXPPP 574
           P    PPP PPP
Sbjct: 495 PAFVAPPPPPPP 506


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,128,470
Number of Sequences: 53049
Number of extensions: 98713
Number of successful extensions: 1571
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5760175428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)