Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_I13
         (941 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.27 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.47 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.82 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   1.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   5.8  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   7.7  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 0.27
 Identities = 17/45 (37%), Positives = 18/45 (40%)
 Frame = +1

Query: 688 GGGGXXXPPGGGGXGXPXXGGGXXKKXFXXXGXXXGXXXXXGGGG 822
           GGGG    PG GG G    GGG  +          G     GGGG
Sbjct: 214 GGGGSSGGPGPGGGGG---GGGRDRDHRDRDREREGGGNGGGGGG 255



 Score = 28.3 bits (60), Expect = 0.36
 Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +1

Query: 688 GGGGXXXPPGGGGX-GXPXXGGG 753
           GG G   P GGGG  G P  GGG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGG 227



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 649 GGGGXKNXXPPPPGGG 602
           GGGG  +  P P GGG
Sbjct: 213 GGGGGSSGGPGPGGGG 228



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 18/59 (30%), Positives = 20/59 (33%)
 Frame = +1

Query: 715 GGGGXGXPXXGGGXXKKXFXXXGXXXGXXXXXGGGGXXXFXXXPPXEKXXLGGXGGKKG 891
           GGGG G    GGG         G   G     GGGG          ++   GG  G  G
Sbjct: 203 GGGGSGGGAPGGG--------GGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGG 253


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 0.47
 Identities = 15/46 (32%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
 Frame = -1

Query: 821 PPPPXXXXXPXXXPXXKXIFXXXPPPXXGXPXPPPP--GGXXXPPP 690
           PP P     P   P    +    P    G P PP P  GG    PP
Sbjct: 268 PPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGPP 313



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 3/23 (13%)
 Frame = -1

Query: 749 PPXXGXPX---PPPPGGXXXPPP 690
           PP  G P    PP PGG    PP
Sbjct: 200 PPRTGTPTQPQPPRPGGMYPQPP 222


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 0.82
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 737 GXPXPPPPGGXXXPPPP 687
           G P PPPPGG     PP
Sbjct: 529 GPPPPPPPGGAVLNIPP 545



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 10/27 (37%), Positives = 10/27 (37%)
 Frame = +1

Query: 637 PPPPPPPXKXXXXXXXXGGGGXXXPPG 717
           PP PPPP           GG    P G
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPLGGPAG 608



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 637 PPPPPPP 657
           PPPPPPP
Sbjct: 530 PPPPPPP 536


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +1

Query: 688 GGGGXXXPPGGGGXGXPXXGGG 753
           GGGG     G GG G    GGG
Sbjct: 658 GGGGGGGSVGSGGIGSSSLGGG 679



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +1

Query: 688 GGGGXXXPPGGGGXGXPXXGGG 753
           GG G     GGGG G    GGG
Sbjct: 669 GGIGSSSLGGGGGSGRSSSGGG 690


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +1

Query: 688 GGGGXXXPPGGGGXGXPXXGGG 753
           GG G     GGGG G    GGG
Sbjct: 553 GGVGSGIGGGGGGGGGGRAGGG 574


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 637 PPPPPPP 657
           PPPPPPP
Sbjct: 783 PPPPPPP 789



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 637 PPPPPPP 657
           PPPPPPP
Sbjct: 784 PPPPPPP 790



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 637 PPPPPPP 657
           PPPPPPP
Sbjct: 785 PPPPPPP 791


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,904
Number of Sequences: 2352
Number of extensions: 5152
Number of successful extensions: 108
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)