Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_I11
         (936 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein p...   113   5e-27
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    28   0.35 
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    25   4.4  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   7.6  

>AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein
           protein.
          Length = 234

 Score =  113 bits (273), Expect = 5e-27
 Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 2/176 (1%)
 Frame = +1

Query: 184 MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQ 363
           M   +Y   +T +SP G+L Q+EYA+ AV  G+ ++G+K  +  V+    +  S L    
Sbjct: 1   MASERYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKAVNGVVIATENKQKSILYDEH 60

Query: 364 K--KIIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQI 537
              K+  +  HIG+  SG+  D R+L +  R    N+  ++  P+P  +L+  V   MQ 
Sbjct: 61  SVHKVEMVTNHIGMIYSGMGPDYRLLVKQARKLAQNYYLTYREPIPTSQLVQKVATVMQE 120

Query: 538 CTQRYDKRPLGVGLLVAGYDDQGPHIYQTCPSANYFDCRAMAIGARSQSARTYLEK 705
            TQ    RP GV LL+ G+DD  P+++Q  PS  YF  +A A+G  + + +T+LEK
Sbjct: 121 YTQSGGVRPFGVSLLICGWDDGRPYLFQCDPSGAYFAWKATAMGKNANNGKTFLEK 176


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 28.3 bits (60), Expect = 0.35
 Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
 Frame = +2

Query: 584 LLVMMTKDLIFTRLVRQPT---TLIVVRWQSEHVRSQRVPI-LRSISIH 718
           +L ++ K L+FT ++   +   T+I++ W     R+ R+P+ +RS+ +H
Sbjct: 291 VLPLIAKYLLFTFIMNTVSILVTVIIINWNFRGPRTHRMPMWIRSVFLH 339


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 882 NSRDNXSSSHIRNGVXDRRY 823
           N  DN + +H+  G+ DRRY
Sbjct: 617 NENDNCNDAHMFCGLRDRRY 636


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 541  YKSAFCYQLTR*DVQLALEHHENIGD 464
            YK A  Y L   D  L L H +NIG+
Sbjct: 1102 YKPAPLYILDEVDAALDLSHTQNIGN 1127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 936,451
Number of Sequences: 2352
Number of extensions: 19166
Number of successful extensions: 107
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102122397
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)