Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_I11
(936 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 226 2e-59
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 128 6e-30
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 125 4e-29
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 122 4e-28
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 114 1e-25
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 94 1e-19
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 81 8e-16
Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical pr... 32 0.68
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 28 8.3
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 226 bits (552), Expect = 2e-59
Identities = 102/179 (56%), Positives = 139/179 (77%)
Frame = +1
Query: 184 MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQ 363
MFRNQYD DVTVWSPQGRLHQVEYA+EA+K GSAT+G+K++ +AV++ALKRA ++LS++Q
Sbjct: 1 MFRNQYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQ 60
Query: 364 KKIIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICT 543
KK+ ID H G+SI+GL +D R+L+RY++TEC + R+ + +P+ +L S+ K+Q T
Sbjct: 61 KKVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANT 120
Query: 544 QRYDKRPLGVGLLVAGYDDQGPHIYQTCPSANYFDCRAMAIGARSQSARTYLEKHLNTF 720
Q Y +RP GVG+L+AGYD G HI QT PSA +IGARSQSARTYLE++++ F
Sbjct: 121 QYYGRRPFGVGILIAGYDKDGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNF 179
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3
Query: 738 QELVAHGLRALRDTLPNEVDLNTKNVSICIVG 833
++L+ H L ALRDTLP E +LN +N SI IVG
Sbjct: 185 EQLIVHALLALRDTLPAEENLNAQNTSIGIVG 216
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 128 bits (309), Expect = 6e-30
Identities = 65/174 (37%), Positives = 105/174 (60%), Gaps = 3/174 (1%)
Frame = +1
Query: 193 NQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQ--K 366
N+YD +T++SP G L QVEYA EAVK GS +G++ KD V+ K+++ L + +
Sbjct: 2 NRYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIR 61
Query: 367 KIIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQ 546
KI ID+H+ ++ +GL+ADAR+L R EC +++ + + P+ V + + N Q TQ
Sbjct: 62 KIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQ 121
Query: 547 RYDKRPLGVGLLVAGYDDQG-PHIYQTCPSANYFDCRAMAIGARSQSARTYLEK 705
+RP G+ +L+ G+D G P +++T PS Y++ A A G + R YLE+
Sbjct: 122 SPGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEE 175
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 125 bits (302), Expect = 4e-29
Identities = 69/178 (38%), Positives = 105/178 (58%), Gaps = 6/178 (3%)
Frame = +1
Query: 190 RNQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQ-- 363
R++YD V +SP+GRL QVEYA+EAVKLGS +IG+K + +L A KR+ S+L
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAI 64
Query: 364 KKIIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGN-KMQI- 537
+KI +D+HIG++ +GL AD+R L + E N ++++ + V + SV N +Q
Sbjct: 65 EKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFG 124
Query: 538 --CTQRYDKRPLGVGLLVAGYDDQGPHIYQTCPSANYFDCRAMAIGARSQSARTYLEK 705
+ RP GV +L AG D +G ++ PS + DC+A +IGA S A L++
Sbjct: 125 DDDVKASMSRPFGVAMLFAGVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKE 182
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 122 bits (294), Expect = 4e-28
Identities = 65/174 (37%), Positives = 107/174 (61%), Gaps = 4/174 (2%)
Frame = +1
Query: 196 QYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEL---SAYQK 366
+YDS T++SP+GRL+QVEYAMEA+ +G+ + + V+ A ++ V +L S +
Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTE 63
Query: 367 KIIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQ 546
K+ + ++I +++G+TADA +L ++R ++R S+ MPV +L+ ++ N+ Q TQ
Sbjct: 64 KVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQ 123
Query: 547 RYDKRPLGVGLLVAGYDDQ-GPHIYQTCPSANYFDCRAMAIGARSQSARTYLEK 705
KRP GV LL G+D G +YQ+ PS NY +A IG+ Q+A T L++
Sbjct: 124 IGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQ 177
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 114 bits (274), Expect = 1e-25
Identities = 63/176 (35%), Positives = 98/176 (55%), Gaps = 2/176 (1%)
Frame = +1
Query: 193 NQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQKKI 372
+ Y +T +SP G+L Q+EYA+ AVK G ++GL+ KD V++A + S L+ Q K+
Sbjct: 3 DHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKD-GVVLATENVGSVLTDDQPKV 61
Query: 373 IPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRY 552
I +HIG SG+ D R+L + R + + + MP +L++ + MQ TQ
Sbjct: 62 EQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSG 121
Query: 553 DKRPLGVGLLVAGYDDQ--GPHIYQTCPSANYFDCRAMAIGARSQSARTYLEKHLN 714
RP G LL+AG+D P ++Q PS YF +A A+G +A+T+LEK +
Sbjct: 122 GVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFS 177
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 94.3 bits (224), Expect = 1e-19
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Frame = +1
Query: 199 YDSDVTVWSPQGRLHQVEYAMEAVKLGSAT-IGLKNKDYAVLIALKRAVSELSAYQ--KK 369
+D +T++SP+GR++QVEYA +A+ + T + +K D AV+ KR L
Sbjct: 9 FDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTS 68
Query: 370 IIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQR 549
+ I + +G G+ DA+ + + E + +Y + MP L + + Q TQ
Sbjct: 69 VYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQN 128
Query: 550 YDKRPLGVGLLVAGYDDQ-GPHIYQTCPSANYFDCRAMAIGARSQSARTYLEKHL 711
+ R LG LL YDD+ GP +Y+ P+ Y + +++G + A ++LEK +
Sbjct: 129 AEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKI 183
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 81.4 bits (192), Expect = 8e-16
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
Frame = +1
Query: 199 YDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEL--SAYQKKI 372
YD + +SP GR+ QVEYA +AV I ++ K+ V++A K S+L ++
Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRM 67
Query: 373 IPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRY 552
+++++G++++G D L Y E + + PMP+ + +SV + I T
Sbjct: 68 FNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTLGI 127
Query: 553 DKRPLGVGLLVAGYDDQ-GPHIYQTCPSANYFDCRAMAIGARSQSARTYLEK 705
RP G G ++ Q G ++ PS ++ +A A+G Q+A+ +EK
Sbjct: 128 -SRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEK 178
>Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical
protein K05C4.1 protein.
Length = 284
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/114 (23%), Positives = 51/114 (44%)
Frame = +1
Query: 367 KIIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQ 546
KI+ I + + +++G AD + +R + C + + V N +
Sbjct: 104 KILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREKTSITVSAASKYFANTLY---- 159
Query: 547 RYDKRPLGVGLLVAGYDDQGPHIYQTCPSANYFDCRAMAIGARSQSARTYLEKH 708
Y + L VG +VAGYD +GP I++ + + ++G+ S +A L+ H
Sbjct: 160 GYRGQGLSVGSMVAGYDKKGPQIFKVDSEGDRCQLKVCSVGSGSLNAYGILDNH 213
>Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical
protein C47B2.4 protein.
Length = 277
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 565 LGVGLLVAGYDDQGPHIYQTCPSANYFDCRAMAIGARSQSARTYLEKHLNTFM 723
+G LL+ G D GPH+Y + A G+ S +A T LE+ M
Sbjct: 140 IGAYLLIGGVDPTGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKVDM 192
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 328 TLSTPHSPYSSDQWLQNQVSQLPLHTPLDGDGLED 224
T+++ H+ + Q +QN++S +P H P G E+
Sbjct: 345 TITSVHAKSHNVQIVQNKISSVPSHLPTSNGGKEN 379
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,413,247
Number of Sequences: 27780
Number of extensions: 426660
Number of successful extensions: 1067
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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