Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_I09
         (967 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3JT18 Cluster: Flavoprotein reductase; n=2; Burkholder...    35   2.7  
UniRef50_UPI0000EBD5BD Cluster: PREDICTED: hypothetical protein,...    34   4.7  
UniRef50_Q8GGE1 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  
UniRef50_Q4GYH6 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  

>UniRef50_Q3JT18 Cluster: Flavoprotein reductase; n=2;
           Burkholderia|Rep: Flavoprotein reductase - Burkholderia
           pseudomallei (strain 1710b)
          Length = 421

 Score = 35.1 bits (77), Expect = 2.7
 Identities = 26/75 (34%), Positives = 28/75 (37%)
 Frame = -1

Query: 283 PHNPEFKIKSPIMDMRVCLXASRRGESRQ*ARPVQRPSDVAGRRRPSHRAHATPATCWGG 104
           P       + P +  R C    RR       RP  RP   A RR    RA A PA C G 
Sbjct: 314 PRPRSISARCPRLPARACGPRRRRSSG---TRPTPRPPRDAVRRSAIRRAAARPARCTGA 370

Query: 103 RVARGSLAQSRCAAR 59
           R  R   A   C AR
Sbjct: 371 RTDR--RAARACRAR 383


>UniRef50_UPI0000EBD5BD Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Bos taurus|Rep: PREDICTED: hypothetical
           protein, partial - Bos taurus
          Length = 331

 Score = 34.3 bits (75), Expect = 4.7
 Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 91  RVQRDRPNMWLGSRGPGATAG-GVQRRRSASGLAALTDVTRLDDS 222
           R + D P  W GSR P   AG G + RRSA G  AL    R +DS
Sbjct: 37  RAKSDLPR-WSGSRPPCEAAGRGARSRRSAGGCTALPARVRSEDS 80


>UniRef50_Q8GGE1 Cluster: Putative uncharacterized protein; n=1;
           Streptomyces sp. EN27|Rep: Putative uncharacterized
           protein - Streptomyces sp. EN27
          Length = 124

 Score = 33.5 bits (73), Expect = 8.3
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +3

Query: 105 PPQHVAGVAWARCDGRRRPATSLGLWTGRAY*RDSPRRLAXRQTRISI 248
           P Q VAGV +  C+      + LG W+ R Y + S R+ A    R+ +
Sbjct: 6   PKQRVAGVEYLSCEWCGEAVSQLGSWSPRRYCKRSHRQRAFEARRLGL 53


>UniRef50_Q4GYH6 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 1249

 Score = 33.5 bits (73), Expect = 8.3
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +1

Query: 61  GQRSGTVPGYRVQRDRPNMWLGSRGPGATAGGVQRRRSASGLAALTDVTRLDDSRXDKR 237
           G R G+ P    +R RP+  + +    +T+GG    RSAS   A  D   + D R   R
Sbjct: 37  GTRRGSAPTAGGRRGRPSAHMRNEAAISTSGGAAASRSASRQGAHIDYAAVSDGRTTSR 95


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,452,390
Number of Sequences: 1657284
Number of extensions: 12044212
Number of successful extensions: 36600
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36558
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 89815291940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)