Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_I09
         (967 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0534 - 4635122-4635380,4635716-4635837                           30   2.4  
05_07_0035 - 27221338-27221433,27221510-27221599,27222056-272221...    29   7.3  
07_01_1013 - 8593690-8595006,8595275-8595928,8595951-8596065,859...    28   9.7  

>08_01_0534 - 4635122-4635380,4635716-4635837
          Length = 126

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +3

Query: 54  GTRAAQRDCARLPRATRPPQHVAGVAWARCDGRRRPATSLGLWTG 188
           G+ AAQ   AR     R     +GV W  C GR    +++G WTG
Sbjct: 51  GSPAAQLSVAR--EWQRVEGDGSGVKWKSCGGRTGSRSAVGRWTG 93


>05_07_0035 -
           27221338-27221433,27221510-27221599,27222056-27222115,
           27222231-27222523,27222601-27222757,27222917-27223261,
           27223890-27224020,27224119-27224596,27224817-27225563
          Length = 798

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = -2

Query: 222 RVVEASHVSKRGQSRGRATSLDAAGRRTGPTRPQPHVGAVALHAVAWHSPAALP 61
           R++ + H S    +   A+S  ++G    P  P P  GA  L       PAA P
Sbjct: 26  RLLSSRHASSSSSTTAAASSSSSSGGNRAPPAPNPTRGAPWLQKWGPTDPAAPP 79


>07_01_1013 -
           8593690-8595006,8595275-8595928,8595951-8596065,
           8596560-8596861,8596884-8597369
          Length = 957

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = -2

Query: 258 SPPLWICAFVXSRVVEASHVSKRGQSRGRATSLDAAGRRTGPTRPQP 118
           +PPLW+  F   +  +A +V +     GR T L+   R     RP P
Sbjct: 482 TPPLWVAMFKLLKDRDAINVFELSNPEGRKTLLEHLARE--DVRPDP 526


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,450,246
Number of Sequences: 37544
Number of extensions: 344305
Number of successful extensions: 1238
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)