Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_I08
(911 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 35 0.10
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 34 0.14
07_03_1136 + 24218601-24218734,24218769-24219906 32 0.55
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 31 0.96
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 31 1.7
11_06_0610 - 25449085-25453284 30 2.2
07_03_1713 + 28939446-28939574,28939674-28940231,28940338-289404... 30 2.9
01_03_0005 + 11568545-11569119,11569179-11569191 30 2.9
07_01_0479 + 3606663-3607448 29 3.9
05_01_0142 - 940421-940701,941262-941574 29 3.9
12_02_0998 + 25126114-25126596,25129213-25129339,25129349-251294... 29 5.1
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 29 5.1
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 6.8
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 29 6.8
03_06_0242 + 32596846-32597268 29 6.8
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 6.8
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 28 9.0
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 34.7 bits (76), Expect = 0.10
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +1
Query: 403 PPXGGXXXXXPPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPPXXXXGGG 555
PP PP P+G P PP P PPPPP GG
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG 376
Score = 31.5 bits (68), Expect = 0.96
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Frame = -3
Query: 786 PPPR---GXXXXXPPXKGGPXXVXFPXFSPPTDPXKXXPPXXXGXGFFXXPPXFXXKIXG 616
PPP+ PP K P P PP P K PP G PP G
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPP-PKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKG 375
Query: 615 GPP 607
GPP
Sbjct: 376 GPP 378
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +1
Query: 403 PPXGGXXXXXPPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPP 534
PP PP P+G P PPG +K G PPPPP
Sbjct: 344 PPPPPPAKGPPPPPPPKGPSPPPPP--PPGGKKGG----PPPPP 381
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 34.3 bits (75), Expect = 0.14
Identities = 37/128 (28%), Positives = 37/128 (28%), Gaps = 12/128 (9%)
Frame = +3
Query: 435 PXKXXPGGXPXGKXLXPPXGGKXGXXXXPPPPPXXXKXGGXIXKKXXF------XPPPXK 596
P PGG G PP GG G PP PP GG PPP
Sbjct: 1110 PPPPPPGGIT-GVPPPPPIGG-LGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPA 1167
Query: 597 XXFXGXPPKFXXKXXGGXKKXPXP------VGXXXXXXXXXXXXKXXGXKXXXGPPXGGX 758
G PP GG P P VG G PP GG
Sbjct: 1168 GFRGGTPP---PNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGR 1224
Query: 759 PXXXPPGG 782
PPGG
Sbjct: 1225 GLPAPPGG 1232
Score = 31.5 bits (68), Expect = 0.96
Identities = 23/72 (31%), Positives = 23/72 (31%)
Frame = +1
Query: 403 PPXGGXXXXXPPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPPXXXXGGGXFXKKXXFX 582
PP GG PP P G G PP G PPPP GG
Sbjct: 1152 PPVGGLGG--PPAPPPPAGFRGGT---PPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPA 1206
Query: 583 PPXKXKXXGGXP 618
PP GG P
Sbjct: 1207 PPMPPGVPGGPP 1218
Score = 28.3 bits (60), Expect = 9.0
Identities = 34/120 (28%), Positives = 37/120 (30%), Gaps = 2/120 (1%)
Frame = -3
Query: 786 PPPRGXXXXXPPXKGGPXXVXFPXFSPPT--DPXKXXPPXXXGXGFFXXPPXFXXKIXGG 613
PPP +GG + P PPT D PP G G PP
Sbjct: 1065 PPPPQRENTSVGIQGGIPPLPPPL--PPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVP 1122
Query: 612 PPXXFXFXGGXKXXFFXKXPPPXXXXXGGGGXXGXXXFFXPXGXKXFXPXGPPPGXFXGG 433
PP GG + PP G GG P G P PPP F GG
Sbjct: 1123 PPPPIGGLGGHQA------PPAPPLPEGIGGVPPPP----PVGGLGGPPAPPPPAGFRGG 1172
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +1
Query: 403 PPXGGXXXXXPPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPPXXXXGG 552
PP G PP G P PP G PPPPP GG
Sbjct: 1089 PPTLGDYGVAPPPPSIGAGAP------PPPPPPGGITGVPPPPPIGGLGG 1132
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +1
Query: 403 PPXGGXXXXXPPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPPXXXXGGG 555
PP PP P GG G PP G PP PP GG
Sbjct: 1099 PPPPSIGAGAPPPPPPPGGITGVP--PPPPIGGLGGHQAPPAPPLPEGIGG 1147
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 32.3 bits (70), Expect = 0.55
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -1
Query: 533 GGGGGXXGXPXFSXPGGXKXFXPGXPPRGXFXGGXXXXXPPXGG 402
GGGGG P PGG + G PP G GG P GG
Sbjct: 151 GGGGGALARP----PGGGRGGALGRPPGGGGGGGGPGRAPGGGG 190
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -1
Query: 530 GGGGXXGXPXFSXPGGXKXFXPGXPPRGXFXGGXXXXXPPXGG 402
GGGG G P + GG PG P G GG GG
Sbjct: 174 GGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLGGGGGEGG 216
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Frame = +2
Query: 608 GGPPXIFX-KXXGGXKKXPXPXXXGGXXFXGSVGGEKXGKXTXXGPPFXG-GXXXXXPRG 781
GGPP + GG + P P GG V G G PP G G P G
Sbjct: 115 GGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPG 174
Query: 782 GG 787
GG
Sbjct: 175 GG 176
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +3
Query: 402 APXGGXPXXXXPXKXXPGGXPXGKXLXPPXGGKXGXXXXPP 524
AP GG P + GG G PP GG+ G PP
Sbjct: 134 APGGGG-GGGAPRRVLGGGGGGGALARPPGGGRGGALGRPP 173
Score = 28.7 bits (61), Expect = 6.8
Identities = 24/78 (30%), Positives = 25/78 (32%), Gaps = 6/78 (7%)
Frame = -3
Query: 618 GGPPXXFXFXGGXKXXFFXKXPPPXXXXXGG------GGXXGXXXFFXPXGXKXFXPXGP 457
GGPP GG + P P GG GG G P G G
Sbjct: 115 GGPPSLPPGAGGGGGA---RPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGR 171
Query: 456 PPGXFXGGXXXXGXPXGG 403
PPG GG P GG
Sbjct: 172 PPGGGGGGGGPGRAPGGG 189
Score = 28.7 bits (61), Expect = 6.8
Identities = 35/128 (27%), Positives = 35/128 (27%)
Frame = +2
Query: 404 PPXGXPXXKXPPKXXPGGGPXGXXXFXPXGXKKXXXPXXPPPPXKXKXGGGXXXKXXFFX 583
P G PP PGGG G G PP GGG
Sbjct: 122 PGAGGGGGARPPA--PGGGGGGGAPRRVLGGGGGGGALARPP------GGGRGGALG--R 171
Query: 584 PPXKXKXXGGPPXIFXKXXGGXKKXPXPXXXGGXXFXGSVGGEKXGKXTXXGPPFXGGXX 763
PP GGP GG P GG G GGE G GG
Sbjct: 172 PPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLGGGGGEGGAPERVIGGGGGGGGA 231
Query: 764 XXXPRGGG 787
GGG
Sbjct: 232 LKCVVGGG 239
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -1
Query: 533 GGGGGXXGXPXFSXPGGXKXFXPGXPPRGXFXGGXXXXXPPXGG 402
GG GG G P GG PG P G GG P GG
Sbjct: 163 GGRGGALGRPPGGGGGGG---GPGRAPGGGGGGGGPGRAPGGGG 203
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 31.5 bits (68), Expect = 0.96
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +1
Query: 484 PPGXEKXGXPXXPPPPPXXXXGGGXFXKKXXFXPPXKXKXXGG 612
PPG P PPP GGG + F PP + G
Sbjct: 724 PPGITPSPPEYAPEPPPGPPGGGGGYLPPVVFPPPYASRGPPG 766
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 433 PPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPP 534
PP P G P PP K G P PPPPP
Sbjct: 920 PPPPRPPGAPP-----PPPPPGKPGGPPPPPPPP 948
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 450 PGGXPXGKXLXPPXGGKXGXXXXPPPPP 533
P P G PP GK G PPPPP
Sbjct: 921 PPPRPPGAPPPPPPPGKPGGPPPPPPPP 948
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/56 (25%), Positives = 19/56 (33%)
Frame = +1
Query: 433 PPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPPXXXXGGGXFXKKXXFXPPXKXK 600
PP P+ P + + PP K P P PP + + PP K
Sbjct: 966 PPSPTPKSSPPSHEEYVPPSPAKSTPPPEKPLPPHTPTINSSPPSEEEYMPPSPVK 1021
>07_03_1713 +
28939446-28939574,28939674-28940231,28940338-28940460,
28940676-28940912
Length = 348
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +1
Query: 466 GXKXFXPPGXEKXGXPXXPPPPPXXXXGGGXFXKKXXFXPP 588
G + + PP G PPPPP G G + F PP
Sbjct: 120 GPEAYAPPPPPAYGHQAYPPPPPNREPGHG-YHPAPAFYPP 159
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = -1
Query: 554 PPPFXXXGGGGGXXGXPXFSXPGGXKXFXPGXPPRGXFXGGXXXXXPPXGG 402
PP + GGGGG G ++ P G G GG PP GG
Sbjct: 72 PPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTG---GGGIYYPPPTGG 119
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/60 (28%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = -1
Query: 587 GGXKXXFFXNXPPPFXXXGGGGGXXGXP-XFSXPGGXKXFXPGXPPRGXFXGGXXXXXPP 411
GG + + PPP+ GGG G + P G G +G GG PP
Sbjct: 83 GGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGGGGGWQQGGGGGGAYPTPPP 142
Score = 28.7 bits (61), Expect = 6.8
Identities = 24/82 (29%), Positives = 27/82 (32%), Gaps = 3/82 (3%)
Frame = -2
Query: 646 PPXXFXKNXGGXPXXFXFXGGGKKXXFXXXXPPXFXFXGG---GGGXXXXPFFPPXGGKX 476
PP + GG GGG + PP GG GGG P PP GG
Sbjct: 71 PPPSYPSGGGGG-------GGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYP--PPTGGGG 121
Query: 475 XXPXGXPPGXXFXGXFXXGXPP 410
G G G + PP
Sbjct: 122 GGGGGWQQGGGGGGAYPTPPPP 143
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 403 PPXGGXXXXXPPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPP 531
PP G PP P PG PPG P PPPP
Sbjct: 202 PPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMR----PGMPPPP 240
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 796 GXPXPPPGGXXXGXPPKGGP 737
G P PPPG G PP G P
Sbjct: 199 GGPPPPPGPFMRGPPPMGPP 218
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/57 (26%), Positives = 20/57 (35%)
Frame = +1
Query: 448 PRGGXPGXKXFXPPGXEKXGXPXXPPPPPXXXXGGGXFXKKXXFXPPXKXKXXGGXP 618
P+G P + PP P PPPP + + + PP GG P
Sbjct: 37 PQGYPPPPGAYPPPPGAYPPPPGAYPPPPGAYPPQHGYPQPGGYPPPGGYPQHGGYP 93
>12_02_0998 +
25126114-25126596,25129213-25129339,25129349-25129459,
25130122-25130270,25130356-25130643,25130753-25130941,
25131445-25131619,25132219-25132316
Length = 539
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 786 PPPRGXXXXXPPXKGGPXXVXFPXFSPPTDPXKXXPP 676
PPP G PP GGP P F PP PP
Sbjct: 311 PPPWGHPSNVPP--GGPGYGGNPQFMPPRPQDHYYPP 345
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 434 PPKXXPGGGPXGXXXFXPXGXKKXXXPXXPPPP 532
PP P G G P G K+ P PPPP
Sbjct: 12 PPPPPPPFGRGGGGAGYPRGHKQLYAPPPPPPP 44
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = -3
Query: 795 GXXPPPRGXXXXXPPXKGGPXXVXFPXFSPPTDPXKXXPPXXXGXGFFXXPP 640
G PP + PP +G P P PP P PP F PP
Sbjct: 29 GPPPPQQPAYGHMPPPQGAPPPFLAP---PPPPPPGPPPPHQPQFNFGPGPP 77
>07_03_1147 +
24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 442 KXPRGGXPGXKXFXPPGXEKXGXPXXPPPPPXXXXG 549
K PR P + PP + P PPPPP G
Sbjct: 41 KCPRFAPPPPQPTLPPPPPRTLPPPPPPPPPQPPVG 76
>03_06_0242 + 32596846-32597268
Length = 140
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 533 GGGGGXXGXPXFSXPGGXKXFXPGXPPR 450
GGGGG G P + G PG PR
Sbjct: 17 GGGGGGVGAPPYRPAAGSVWSLPGMTPR 44
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/71 (28%), Positives = 20/71 (28%), Gaps = 3/71 (4%)
Frame = +1
Query: 415 GXXXXXPPXKXPRGGXPGXKXFXPP---GXEKXGXPXXPPPPPXXXXGGGXFXKKXXFXP 585
G PP P G PG PP G PPP GG P
Sbjct: 298 GSYGQVPPQGPPSYGGPGGDYAAPPSSYGGNNAYNSDSAVPPPSSYGGGPGSYPPSYGAP 357
Query: 586 PXKXKXXGGXP 618
P GG P
Sbjct: 358 PPNPPYSGGAP 368
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 448 PRGGXPGXKXFXPPGXEKXGXPXXPPPPPXXXXG 549
PRG PG + PP K P PPPPP G
Sbjct: 133 PRG--PGQEP-PPPHVPKAAPPPPPPPPPHAPPG 163
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,770,721
Number of Sequences: 37544
Number of extensions: 543578
Number of successful extensions: 2318
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1884
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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