Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_I08
         (911 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.45 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   0.98 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 0.45
 Identities = 16/47 (34%), Positives = 18/47 (38%)
 Frame = +1

Query: 448 PRGGXPGXKXFXPPGXEKXGXPXXPPPPPXXXXGGGXFXKKXXFXPP 588
           P  G P    +   G +  G P  PPPPP    GG        F PP
Sbjct: 508 PNDGPPHGAGYD--GRDLTGGPLGPPPPP--PPGGAVLNIPPQFLPP 550



 Score = 24.2 bits (50), Expect = 5.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 790 PXPPPGGXXXGXPPK 746
           P PPPGG     PP+
Sbjct: 532 PPPPPGGAVLNIPPQ 546


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.6 bits (46), Expect(2) = 0.98
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +1

Query: 511 PXXPPPPPXXXXGGG 555
           P  PPPPP     GG
Sbjct: 784 PPPPPPPPSSLSPGG 798



 Score = 22.2 bits (45), Expect(2) = 0.98
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 505 GXPXXPPPPP 534
           G P  PPPPP
Sbjct: 781 GSPPPPPPPP 790


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
 Frame = +1

Query: 436 PXKXPRGGXPGXKXFXPP---GXEKXGXPXXPPPP 531
           P +   G  PG +   PP   G  + G P  P PP
Sbjct: 178 PARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPP 212


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,959
Number of Sequences: 2352
Number of extensions: 10995
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98814789
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)