Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_I08
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.010
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.010
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.010
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.013
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.013
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.013
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 37 0.017
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 37 0.017
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.16
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 34 0.16
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.16
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 31 0.86
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 0.86
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 1.5
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.0
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.0
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 4.6
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 4.6
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 4.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.1
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 6.1
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 6.1
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 6.1
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 6.1
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 6.1
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 29 6.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.1
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 8.1
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.9 bits (84), Expect = 0.010
Identities = 39/139 (28%), Positives = 40/139 (28%), Gaps = 9/139 (6%)
Frame = +3
Query: 402 APXGGXPXXXXPXKXXPGGXPXGKXLXPPXGGK--XGXXXXPPPP----PXXXKXGGXIX 563
AP G P P K P G PP G PPPP P GG
Sbjct: 231 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 290
Query: 564 KKXXFXPPPXKXXFXGXPP--KFXXKXXGGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXX 737
PPP G PP GG P P G +
Sbjct: 291 PPRAGSPPPPPPP-RGSPPTGSLPPPQAGG---SPPPAGTGSPPPPPRQKRQAPERSPPT 346
Query: 738 G-PPXGGXPXXXPPGGGXG 791
G PP G P PP GG G
Sbjct: 347 GSPPTGSPPTGRPPRGGPG 365
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = -3
Query: 795 GXXPPPRGXXXXXPPXKGGPXXVXFPXFSPPT----DPXKXXPPXXXGXGFFXXPP 640
G PPP PP G P P SPPT P P G G PP
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 795 GXXPPPRGXXXXXPPXKGGPXXVXFPXFSPPTDPXKXXPP 676
G PPP PP G P P SPP P PP
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPP--PTGSPPPPPAGGSPP 290
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.9 bits (84), Expect = 0.010
Identities = 39/139 (28%), Positives = 40/139 (28%), Gaps = 9/139 (6%)
Frame = +3
Query: 402 APXGGXPXXXXPXKXXPGGXPXGKXLXPPXGGK--XGXXXXPPPP----PXXXKXGGXIX 563
AP G P P K P G PP G PPPP P GG
Sbjct: 252 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 311
Query: 564 KKXXFXPPPXKXXFXGXPP--KFXXKXXGGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXX 737
PPP G PP GG P P G +
Sbjct: 312 PPRAGSPPPPPPP-RGSPPTGSLPPPQAGG---SPPPAGTGSPPPPPRQKRQAPERSPPT 367
Query: 738 G-PPXGGXPXXXPPGGGXG 791
G PP G P PP GG G
Sbjct: 368 GSPPTGSPPTGRPPRGGPG 386
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = -3
Query: 795 GXXPPPRGXXXXXPPXKGGPXXVXFPXFSPPT----DPXKXXPPXXXGXGFFXXPP 640
G PPP PP G P P SPPT P P G G PP
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 795 GXXPPPRGXXXXXPPXKGGPXXVXFPXFSPPTDPXKXXPP 676
G PPP PP G P P SPP P PP
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPP--PTGSPPPPPAGGSPP 311
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.9 bits (84), Expect = 0.010
Identities = 39/139 (28%), Positives = 40/139 (28%), Gaps = 9/139 (6%)
Frame = +3
Query: 402 APXGGXPXXXXPXKXXPGGXPXGKXLXPPXGGK--XGXXXXPPPP----PXXXKXGGXIX 563
AP G P P K P G PP G PPPP P GG
Sbjct: 237 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 296
Query: 564 KKXXFXPPPXKXXFXGXPP--KFXXKXXGGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXX 737
PPP G PP GG P P G +
Sbjct: 297 PPRAGSPPPPPPP-RGSPPTGSLPPPQAGG---SPPPAGTGSPPPPPRQKRQAPERSPPT 352
Query: 738 G-PPXGGXPXXXPPGGGXG 791
G PP G P PP GG G
Sbjct: 353 GSPPTGSPPTGRPPRGGPG 371
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = -3
Query: 795 GXXPPPRGXXXXXPPXKGGPXXVXFPXFSPPT----DPXKXXPPXXXGXGFFXXPP 640
G PPP PP G P P SPPT P P G G PP
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 795 GXXPPPRGXXXXXPPXKGGPXXVXFPXFSPPTDPXKXXPP 676
G PPP PP G P P SPP P PP
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPP--PTGSPPPPPAGGSPP 296
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.5 bits (83), Expect = 0.013
Identities = 21/47 (44%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +1
Query: 403 PPXGGXXXXX---PPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPP 534
PP GG PP P GG P PPG K G P PPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP--PPPPP 790
Score = 36.7 bits (81), Expect = 0.023
Identities = 21/54 (38%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Frame = +1
Query: 403 PPXGGXXXXX--PPXKXPRGGXPGXKXFXPPGXEKXGX-PXXPPPPPXXXXGGG 555
PP GG PP P GG P PP G P PPPPP GG
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 34.3 bits (75), Expect = 0.12
Identities = 28/88 (31%), Positives = 28/88 (31%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLXPPXGGKXGXXXXPPPPPXXXKXGGXIXKKXXFXP 584
P G P GG P PP GG PPPPP GG P
Sbjct: 708 PITGGPPPPPGLPPITGGPPP----PPPPGGLPPITGGPPPPPPP---GGL--PPISGGP 758
Query: 585 PPXKXXFXGXPPKFXXKXXGGXKKXPXP 668
PP G PP GG K P P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -3
Query: 786 PPPRGXXXXXPPXKGGPXXVXFPXFSPPTDPXKXXPPXXXGXGFFXXPPXFXXKIXGGPP 607
PPP PP GGP P PP PP G PP GGPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 32.3 bits (70), Expect = 0.49
Identities = 32/102 (31%), Positives = 32/102 (31%)
Frame = -3
Query: 795 GXXPPPRGXXXXXPPXKGGPXXVXFPXFSPPTDPXKXXPPXXXGXGFFXXPPXFXXKIXG 616
G PPP G PP GGP PP P PP G PP I G
Sbjct: 711 GGPPPPPGL----PPITGGP---------PPPPPPGGLPPITGGPP-PPPPPGGLPPISG 756
Query: 615 GPPXXFXFXGGXKXXFFXKXPPPXXXXXGGGGXXGXXXFFXP 490
GPP GG PPP GG F P
Sbjct: 757 GPPPPPPPPGGCPP---PPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = +1
Query: 403 PPXGGXXXXXPPXKXPRGGXPGXKXFXPPGXEKXGXP---XXPPPPPXXXXG 549
PP PP P GG P PP G P PPPPP G
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.5 bits (83), Expect = 0.013
Identities = 21/47 (44%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +1
Query: 403 PPXGGXXXXX---PPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPP 534
PP GG PP P GG P PPG K G P PPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP--PPPPP 790
Score = 36.7 bits (81), Expect = 0.023
Identities = 21/54 (38%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Frame = +1
Query: 403 PPXGGXXXXX--PPXKXPRGGXPGXKXFXPPGXEKXGX-PXXPPPPPXXXXGGG 555
PP GG PP P GG P PP G P PPPPP GG
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 34.3 bits (75), Expect = 0.12
Identities = 28/88 (31%), Positives = 28/88 (31%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLXPPXGGKXGXXXXPPPPPXXXKXGGXIXKKXXFXP 584
P G P GG P PP GG PPPPP GG P
Sbjct: 708 PITGGPPPPPGLPPITGGPPP----PPPPGGLPPITGGPPPPPPP---GGL--PPISGGP 758
Query: 585 PPXKXXFXGXPPKFXXKXXGGXKKXPXP 668
PP G PP GG K P P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -3
Query: 786 PPPRGXXXXXPPXKGGPXXVXFPXFSPPTDPXKXXPPXXXGXGFFXXPPXFXXKIXGGPP 607
PPP PP GGP P PP PP G PP GGPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 32.3 bits (70), Expect = 0.49
Identities = 32/102 (31%), Positives = 32/102 (31%)
Frame = -3
Query: 795 GXXPPPRGXXXXXPPXKGGPXXVXFPXFSPPTDPXKXXPPXXXGXGFFXXPPXFXXKIXG 616
G PPP G PP GGP PP P PP G PP I G
Sbjct: 711 GGPPPPPGL----PPITGGP---------PPPPPPGGLPPITGGPP-PPPPPGGLPPISG 756
Query: 615 GPPXXFXFXGGXKXXFFXKXPPPXXXXXGGGGXXGXXXFFXP 490
GPP GG PPP GG F P
Sbjct: 757 GPPPPPPPPGGCPP---PPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = +1
Query: 403 PPXGGXXXXXPPXKXPRGGXPGXKXFXPPGXEKXGXP---XXPPPPPXXXXG 549
PP PP P GG P PP G P PPPPP G
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.5 bits (83), Expect = 0.013
Identities = 21/47 (44%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +1
Query: 403 PPXGGXXXXX---PPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPP 534
PP GG PP P GG P PPG K G P PPPPP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP--PPPPP 373
Score = 36.7 bits (81), Expect = 0.023
Identities = 21/54 (38%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Frame = +1
Query: 403 PPXGGXXXXX--PPXKXPRGGXPGXKXFXPPGXEKXGX-PXXPPPPPXXXXGGG 555
PP GG PP P GG P PP G P PPPPP GG
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 34.3 bits (75), Expect = 0.12
Identities = 28/88 (31%), Positives = 28/88 (31%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLXPPXGGKXGXXXXPPPPPXXXKXGGXIXKKXXFXP 584
P G P GG P PP GG PPPPP GG P
Sbjct: 291 PITGGPPPPPGLPPITGGPPP----PPPPGGLPPITGGPPPPPPP---GGL--PPISGGP 341
Query: 585 PPXKXXFXGXPPKFXXKXXGGXKKXPXP 668
PP G PP GG K P P
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -3
Query: 786 PPPRGXXXXXPPXKGGPXXVXFPXFSPPTDPXKXXPPXXXGXGFFXXPPXFXXKIXGGPP 607
PPP PP GGP P PP PP G PP GGPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 32.3 bits (70), Expect = 0.49
Identities = 32/102 (31%), Positives = 32/102 (31%)
Frame = -3
Query: 795 GXXPPPRGXXXXXPPXKGGPXXVXFPXFSPPTDPXKXXPPXXXGXGFFXXPPXFXXKIXG 616
G PPP G PP GGP PP P PP G PP I G
Sbjct: 294 GGPPPPPGL----PPITGGP---------PPPPPPGGLPPITGGPP-PPPPPGGLPPISG 339
Query: 615 GPPXXFXFXGGXKXXFFXKXPPPXXXXXGGGGXXGXXXFFXP 490
GPP GG PPP GG F P
Sbjct: 340 GPPPPPPPPGGCPP---PPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = +1
Query: 403 PPXGGXXXXXPPXKXPRGGXPGXKXFXPPGXEKXGXP---XXPPPPPXXXXG 549
PP PP P GG P PP G P PPPPP G
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 37.1 bits (82), Expect = 0.017
Identities = 34/126 (26%), Positives = 37/126 (29%), Gaps = 8/126 (6%)
Frame = +2
Query: 434 PPKXXPGGGPXGXXXFXPXGXKKXXXPXXP--PPPXKXKXGGGXXXKXXFFXPPXKXKXX 607
PP PGG P F P G P P PPP P
Sbjct: 101 PPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGG 160
Query: 608 GG----PPXIFX--KXXGGXKKXPXPXXXGGXXFXGSVGGEKXGKXTXXGPPFXGGXXXX 769
GG PP GG P GG G +GG G+ GP GG
Sbjct: 161 GGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGM 220
Query: 770 XPRGGG 787
P+ G
Sbjct: 221 LPKSHG 226
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 37.1 bits (82), Expect = 0.017
Identities = 34/126 (26%), Positives = 37/126 (29%), Gaps = 8/126 (6%)
Frame = +2
Query: 434 PPKXXPGGGPXGXXXFXPXGXKKXXXPXXP--PPPXKXKXGGGXXXKXXFFXPPXKXKXX 607
PP PGG P F P G P P PPP P
Sbjct: 381 PPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGG 440
Query: 608 GG----PPXIFX--KXXGGXKKXPXPXXXGGXXFXGSVGGEKXGKXTXXGPPFXGGXXXX 769
GG PP GG P GG G +GG G+ GP GG
Sbjct: 441 GGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGM 500
Query: 770 XPRGGG 787
P+ G
Sbjct: 501 LPKSHG 506
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/75 (29%), Positives = 23/75 (30%), Gaps = 3/75 (4%)
Frame = +1
Query: 403 PPXGGXXXXXPPXKXPRGGXPGXKXFXPP---GXEKXGXPXXPPPPPXXXXGGGXFXKKX 573
P G PP R G PG PP G G PPPP G G +
Sbjct: 308 PGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 367
Query: 574 XFXPPXKXKXXGGXP 618
PP G P
Sbjct: 368 PSRPPAPPSGHGMIP 382
Score = 32.3 bits (70), Expect = 0.49
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = -3
Query: 786 PPPRGXXXXXPPXKGG--PXXVXFPXFSPPTDPXKXXPPXXXGXGFFXXPPXFXXKIXGG 613
PP G PP G P P PP P + PP G G PP + GG
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP---GMGGMPPPPPPGMRYPGG 346
Query: 612 PP 607
P
Sbjct: 347 MP 348
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +1
Query: 403 PPXGGXXXXXPPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPPXXXXG 549
PP P P PG PP P PPPPP G
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG 309
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.16
Identities = 36/135 (26%), Positives = 36/135 (26%), Gaps = 4/135 (2%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLX---PPXGGKXGXXXXPPPPPXXXKXGGXIXK-KX 572
P GG P P P G P G PP GG G PP G
Sbjct: 327 PSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAP 386
Query: 573 XFXPPPXKXXFXGXPPKFXXKXXGGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXXGPPXG 752
PP G PP GG P G G GPP
Sbjct: 387 PSGGPPGPFDPSGAPPS------GGPPGPFNPSGAPPSGGPPGPF-NPSGAPPSGGPPGP 439
Query: 753 GXPXXXPPGGGXGXP 797
P PP GG P
Sbjct: 440 FNPSGAPPSGGPPGP 454
Score = 33.5 bits (73), Expect = 0.21
Identities = 34/135 (25%), Positives = 34/135 (25%), Gaps = 4/135 (2%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLX---PPXGGKXGXXXXPPPPPXXXKXGGXIXK-KX 572
P GG P P P G P G PP GG G PP G
Sbjct: 222 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAP 281
Query: 573 XFXPPPXKXXFXGXPPKFXXKXXGGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXXGPPXG 752
PP G PP G P G GPP
Sbjct: 282 PSGGPPGPFDPSGAPPS-------GGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGP 334
Query: 753 GXPXXXPPGGGXGXP 797
P PP GG P
Sbjct: 335 FDPSGAPPSGGPPGP 349
Score = 33.5 bits (73), Expect = 0.21
Identities = 34/135 (25%), Positives = 34/135 (25%), Gaps = 4/135 (2%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLX---PPXGGKXGXXXXPPPPPXXXKXGGXIXK-KX 572
P GG P P P G P G PP GG G PP G
Sbjct: 252 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQ 311
Query: 573 XFXPPPXKXXFXGXPPKFXXKXXGGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXXGPPXG 752
PP G PP G P G GPP
Sbjct: 312 PSGGPPGPFNPSGAPPS-------GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP 364
Query: 753 GXPXXXPPGGGXGXP 797
P PP GG P
Sbjct: 365 FDPSGAPPSGGPPGP 379
Score = 33.5 bits (73), Expect = 0.21
Identities = 34/135 (25%), Positives = 34/135 (25%), Gaps = 4/135 (2%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLX---PPXGGKXGXXXXPPPPPXXXKXGGXIXK-KX 572
P GG P P P G P G PP GG G PP G
Sbjct: 297 PSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAP 356
Query: 573 XFXPPPXKXXFXGXPPKFXXKXXGGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXXGPPXG 752
PP G PP G P G GPP
Sbjct: 357 PSGGPPGPFDPSGAPPS-------GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGP 409
Query: 753 GXPXXXPPGGGXGXP 797
P PP GG P
Sbjct: 410 FNPSGAPPSGGPPGP 424
Score = 33.5 bits (73), Expect = 0.21
Identities = 34/135 (25%), Positives = 34/135 (25%), Gaps = 4/135 (2%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLX---PPXGGKXGXXXXPPPPPXXXKXGGXIXK-KX 572
P GG P P P G P G PP GG G PP G
Sbjct: 312 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAP 371
Query: 573 XFXPPPXKXXFXGXPPKFXXKXXGGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXXGPPXG 752
PP G PP G P G GPP
Sbjct: 372 PSGGPPGPFDPSGAPPS-------GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP 424
Query: 753 GXPXXXPPGGGXGXP 797
P PP GG P
Sbjct: 425 FNPSGAPPSGGPPGP 439
Score = 33.5 bits (73), Expect = 0.21
Identities = 36/135 (26%), Positives = 36/135 (26%), Gaps = 4/135 (2%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLX---PPXGGKXGXXXXPPPPPXXXKXGGXIXK-KX 572
P GG P P P G P G PP GG G PP G
Sbjct: 342 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAP 401
Query: 573 XFXPPPXKXXFXGXPPKFXXKXXGGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXXGPPXG 752
PP G PP GG P G G GPP
Sbjct: 402 PSGGPPGPFNPSGAPPS------GGPPGPFNPSGAPPSGGPPGPF-NPSGAPPSGGPPGP 454
Query: 753 GXPXXXPPGGGXGXP 797
P PP GG P
Sbjct: 455 FNPSGAPPSGGPPGP 469
Score = 33.5 bits (73), Expect = 0.21
Identities = 36/135 (26%), Positives = 36/135 (26%), Gaps = 4/135 (2%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLX---PPXGGKXGXXXXPPPPPXXXKXGGXIXK-KX 572
P GG P P P G P G PP GG G PP G
Sbjct: 357 PSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAP 416
Query: 573 XFXPPPXKXXFXGXPPKFXXKXXGGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXXGPPXG 752
PP G PP GG P G G GPP
Sbjct: 417 PSGGPPGPFNPSGAPPS------GGPPGPFNPSGAPPSGGPPGPF-NPSGAPPSGGPPGP 469
Query: 753 GXPXXXPPGGGXGXP 797
P PP GG P
Sbjct: 470 FNPSGAPPSGGPPGP 484
Score = 33.5 bits (73), Expect = 0.21
Identities = 36/135 (26%), Positives = 36/135 (26%), Gaps = 4/135 (2%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLX---PPXGGKXGXXXXPPPPPXXXKXGGXIXK-KX 572
P GG P P P G P G PP GG G PP G
Sbjct: 372 PSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAP 431
Query: 573 XFXPPPXKXXFXGXPPKFXXKXXGGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXXGPPXG 752
PP G PP GG P G G GPP
Sbjct: 432 PSGGPPGPFNPSGAPPS------GGPPGPFNPSGAPPSGGPPGPF-NPSGAPPSGGPPGP 484
Query: 753 GXPXXXPPGGGXGXP 797
P PP GG P
Sbjct: 485 FDPSGAPPSGGPPGP 499
Score = 33.5 bits (73), Expect = 0.21
Identities = 36/135 (26%), Positives = 36/135 (26%), Gaps = 4/135 (2%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLX---PPXGGKXGXXXXPPPPPXXXKXGGXIXK-KX 572
P GG P P P G P G PP GG G PP G
Sbjct: 387 PSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAP 446
Query: 573 XFXPPPXKXXFXGXPPKFXXKXXGGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXXGPPXG 752
PP G PP GG P G G GPP
Sbjct: 447 PSGGPPGPFNPSGAPPS------GGPPGPFNPSGAPPSGGPPGPFDPS-GAPPSGGPPGP 499
Query: 753 GXPXXXPPGGGXGXP 797
P PP GG P
Sbjct: 500 FNPSGAPPSGGPPGP 514
Score = 33.1 bits (72), Expect = 0.28
Identities = 44/151 (29%), Positives = 46/151 (30%), Gaps = 14/151 (9%)
Frame = -2
Query: 814 GVFFXXGXPXP--PPGGXXX-GXPPKGGPXXXXXXXXXXXXXXXXXXXPXPTGXGXFFXP 644
G F G P PPG G PP GGP P+G P
Sbjct: 258 GPFNPSGAPPSGGPPGPFDPSGAPPSGGP-PGPFDPSGAPPSGGPPGPFDPSGAQPSGGP 316
Query: 643 PXXFXKN----XGGXPXXFXFXG----GGKKXXFXXXXPPXFXFXGGGGGXXXXPFFPPX 488
P F + GG P F G GG F P GG G PP
Sbjct: 317 PGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPP---SGGPPGPFDPSGAPPS 373
Query: 487 GGK--XXXPXGXPPGXXFXGXF-XXGXPPXG 404
GG P G PP G F G PP G
Sbjct: 374 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSG 404
Score = 33.1 bits (72), Expect = 0.28
Identities = 44/151 (29%), Positives = 46/151 (30%), Gaps = 14/151 (9%)
Frame = -2
Query: 814 GVFFXXGXPXP--PPGGXXX-GXPPKGGPXXXXXXXXXXXXXXXXXXXPXPTGXGXFFXP 644
G F G P PPG G PP GGP P+G P
Sbjct: 378 GPFDPSGAPPSGGPPGPFDPSGAPPSGGP-PGPFNPSGAPPSGGPPGPFNPSGAPPSGGP 436
Query: 643 PXXFXKN----XGGXPXXFXFXG----GGKKXXFXXXXPPXFXFXGGGGGXXXXPFFPPX 488
P F + GG P F G GG F P GG G PP
Sbjct: 437 PGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP---SGGPPGPFDPSGAPPS 493
Query: 487 GGK--XXXPXGXPPGXXFXGXF-XXGXPPXG 404
GG P G PP G F G PP G
Sbjct: 494 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSG 524
Score = 32.3 bits (70), Expect = 0.49
Identities = 34/142 (23%), Positives = 35/142 (24%), Gaps = 4/142 (2%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLX---PPXGGKXGXXXXPPPPPXXXKXGGXIXK-KX 572
P GG P P P G P G PP GG G PP G
Sbjct: 402 PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAP 461
Query: 573 XFXPPPXKXXFXGXPPKFXXKXXGGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXXGPPXG 752
PP G PP G P G GPP
Sbjct: 462 PSGGPPGPFNPSGAPPS-------GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP 514
Query: 753 GXPXXXPPGGGXGXPXXKKTPV 818
P PP G P P+
Sbjct: 515 FDPSGAPPSGMPPVPLPTDLPI 536
Score = 31.9 bits (69), Expect = 0.65
Identities = 38/135 (28%), Positives = 41/135 (30%), Gaps = 9/135 (6%)
Frame = -3
Query: 783 PPRGXXXXXPPXKGGPXXVXFPXFSPPTDPXKXXPPXXXGXGFFXXPPXFXXKIXGGPPX 604
PP P GGP + P +PP+ PP G PP GGPP
Sbjct: 151 PPGPFDPSGAPPSGGPPGLFDPSGAPPS----GGPPGPFGPS--GAPP------SGGPPG 198
Query: 603 XF-----XFXGGXKXXFFXKXPPPXXXXXGGGGXXGXXXFFXPXG---XKXFXPXGPPPG 448
F GG F PP G G P G P G PPG
Sbjct: 199 PFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPG 258
Query: 447 XF-XGGXXXXGXPXG 406
F G G P G
Sbjct: 259 PFNPSGAPPSGGPPG 273
Score = 31.5 bits (68), Expect = 0.86
Identities = 35/143 (24%), Positives = 37/143 (25%), Gaps = 12/143 (8%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLX---PPXGGKXGXXXXPPPPPXXXKXGGXIXK-KX 572
P GG P P + P G P G PP GG G PP G
Sbjct: 192 PSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAP 251
Query: 573 XFXPPPXKXXFXGXPPK------FXXKXX--GGXKKXPXPVGXXXXXXXXXXXXKXXGXK 728
PP G PP F G P G +
Sbjct: 252 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQ 311
Query: 729 XXXGPPXGGXPXXXPPGGGXGXP 797
GPP P PP GG P
Sbjct: 312 PSGGPPGPFNPSGAPPSGGPPGP 334
Score = 31.5 bits (68), Expect = 0.86
Identities = 35/136 (25%), Positives = 35/136 (25%), Gaps = 5/136 (3%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLX---PPXGGKXGXXXXPPPPPXXXKXGGXIXKKXX 575
P GG P P P G P G PP GG G PP GG
Sbjct: 237 PSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS----GGPPGPFDP 292
Query: 576 FXPPPXKXXFXGXPPKFXXKXX--GGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXXGPPX 749
PP G P F G P G GPP
Sbjct: 293 SGAPPS----GGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPG 348
Query: 750 GGXPXXXPPGGGXGXP 797
P PP GG P
Sbjct: 349 PFNPSGAPPSGGPPGP 364
Score = 30.7 bits (66), Expect = 1.5
Identities = 33/134 (24%), Positives = 33/134 (24%), Gaps = 3/134 (2%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXG---KXLXPPXGGKXGXXXXPPPPPXXXKXGGXIXKKXX 575
P GG P P P G P G PP GG G PP GG
Sbjct: 147 PSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPP----SGGPPGPFNP 202
Query: 576 FXPPPXKXXFXGXPPKFXXKXXGGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXXGPPXGG 755
PP P G P G GPP
Sbjct: 203 SEAPPSGGPTGPFDPS--GAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPF 260
Query: 756 XPXXXPPGGGXGXP 797
P PP GG P
Sbjct: 261 NPSGAPPSGGPPGP 274
Score = 30.3 bits (65), Expect = 2.0
Identities = 35/136 (25%), Positives = 35/136 (25%), Gaps = 5/136 (3%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLX---PPXGGKXGXXXXPPPPPXXXKXGGXIXKKXX 575
P GG P P P G P G PP GG G P P GG
Sbjct: 267 PSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPG----PFDPSGAQPSGGPPGPFNP 322
Query: 576 FXPPPXKXXFXGXPPKFXXKXX--GGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXXGPPX 749
PP G P F G P G GPP
Sbjct: 323 SGAPPS----GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPG 378
Query: 750 GGXPXXXPPGGGXGXP 797
P PP GG P
Sbjct: 379 PFDPSGAPPSGGPPGP 394
Score = 30.3 bits (65), Expect = 2.0
Identities = 32/133 (24%), Positives = 32/133 (24%), Gaps = 2/133 (1%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLXPPXGGKXGXXXXPPPPPXXXKXGGXIXKKXXFXP 584
P GG P P P G P G P G P P GG
Sbjct: 282 PSGGPPGPFDPSGAPPSGGPPGP-FDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 340
Query: 585 PPXKXXFXGXPPKFXXKXX--GGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXXGPPXGGX 758
PP G P F G P G GPP
Sbjct: 341 PPS----GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFD 396
Query: 759 PXXXPPGGGXGXP 797
P PP GG P
Sbjct: 397 PSGAPPSGGPPGP 409
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -3
Query: 786 PPPRGXXXXXPPXKGGPXXVXFPXFSPPTDPXKXXPP 676
PPP PP GP + P +PP P PP
Sbjct: 60 PPPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPP 96
Score = 28.7 bits (61), Expect = 6.1
Identities = 28/133 (21%), Positives = 28/133 (21%), Gaps = 2/133 (1%)
Frame = +3
Query: 405 PXGGXPXXXXPXKXXPGGXPXGKXLXPPXGGKXGXXXXPPPPPXXXKXGGXIXKKXXFXP 584
P G P P P G P P G PP P
Sbjct: 157 PSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFD 216
Query: 585 PPXKXXFXGXPPKFXXK--XXGGXKKXPXPVGXXXXXXXXXXXXKXXGXKXXXGPPXGGX 758
P G P F G P G GPP
Sbjct: 217 PSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFD 276
Query: 759 PXXXPPGGGXGXP 797
P PP GG P
Sbjct: 277 PSGAPPSGGPPGP 289
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/75 (29%), Positives = 23/75 (30%), Gaps = 3/75 (4%)
Frame = +1
Query: 403 PPXGGXXXXXPPXKXPRGGXPGXKXFXPP---GXEKXGXPXXPPPPPXXXXGGGXFXKKX 573
P G PP R G PG PP G G PPPP G G +
Sbjct: 318 PGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 377
Query: 574 XFXPPXKXKXXGGXP 618
PP G P
Sbjct: 378 PSRPPAPPSGHGMIP 392
Score = 32.3 bits (70), Expect = 0.49
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = -3
Query: 786 PPPRGXXXXXPPXKGG--PXXVXFPXFSPPTDPXKXXPPXXXGXGFFXXPPXFXXKIXGG 613
PP G PP G P P PP P + PP G G PP + GG
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP---GMGGMPPPPPPGMRYPGG 356
Query: 612 PP 607
P
Sbjct: 357 MP 358
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +1
Query: 403 PPXGGXXXXXPPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPPXXXXG 549
PP P P PG PP P PPPPP G
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG 319
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 31.5 bits (68), Expect = 0.86
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +1
Query: 433 PPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPPXXXXGGGXFXKKXXFXPP 588
PP K G PG PPG + P PP PP G K PP
Sbjct: 133 PPCKPCPEGPPGPAG--PPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPP 182
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 31.5 bits (68), Expect = 0.86
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +1
Query: 406 PXGGXXXXXPPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPPXXXXGGG 555
P G P + + G PG PG P PP PP GG
Sbjct: 221 PPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPGPPGPPGQDGSGG 270
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +1
Query: 433 PPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPPXXXXGGGXFXKKXXFXPP 588
PP K G PG PPG + P PP PP G K PP
Sbjct: 135 PPCKPCPEGPPGPAG--PPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPP 184
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +1
Query: 403 PPXGGXXXXXPPXKXPRGGXP-GXKXFXPPGXEKXGXPXXPPP 528
PP GG PP P G P G PP P PPP
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPP 824
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +1
Query: 403 PPXGGXXXXXPPXKXPRGGXP-GXKXFXPPGXEKXGXPXXPPP 528
PP GG PP P G P G PP P PPP
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPP 824
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/61 (26%), Positives = 17/61 (27%)
Frame = +1
Query: 406 PXGGXXXXXPPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPPXXXXGGGXFXKKXXFXP 585
P G P G PG + PG P PP P GG P
Sbjct: 144 PPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGPAGPAGP 203
Query: 586 P 588
P
Sbjct: 204 P 204
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/61 (26%), Positives = 17/61 (27%)
Frame = +1
Query: 406 PXGGXXXXXPPXKXPRGGXPGXKXFXPPGXEKXGXPXXPPPPPXXXXGGGXFXKKXXFXP 585
P G P G PG + PG P PP P GG P
Sbjct: 144 PPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGPAGPAGP 203
Query: 586 P 588
P
Sbjct: 204 P 204
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 738 GPPXGGXPXXXPPGGGXGXPXXKKTP 815
GP GG P P GGG G P P
Sbjct: 620 GPGGGGGPPRGPGGGGGGGPTGPPAP 645
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 738 GPPXGGXPXXXPPGGGXGXPXXKKTP 815
GP GG P P GGG G P P
Sbjct: 620 GPGGGGGPPRGPGGGGGGGPTGPPAP 645
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = +1
Query: 403 PPXGGXXXXXPPXKXPRGGXPGXKXFX---PPGXEKXGXPXXPPPP 531
PP G PP GG P PP G P PPPP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 483 PPXGGKXGXXXXPPPPPXXXKXGGXIXKKXXFXPPP 590
PP GG G PPPPP G + PPP
Sbjct: 664 PPPGGLGGFMPPPPPPPPMP---GDLSSLLAAAPPP 696
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 6.1
Identities = 33/123 (26%), Positives = 37/123 (30%), Gaps = 5/123 (4%)
Frame = -3
Query: 756 PPXKGGPXXVXFPXFSPPTDPXKXXPPXXXGXGFFXXPPXFXX-----KIXGGPPXXFXF 592
PP +G P +PP P + PP G F PP + GGPP
Sbjct: 321 PPPQGAPQQ---GFGAPPQGPPQGGPPQ----GSFGAPPPQQFHAPSPQSFGGPPPPVSS 373
Query: 591 XGGXKXXFFXKXPPPXXXXXGGGGXXGXXXFFXPXGXKXFXPXGPPPGXFXGGXXXXGXP 412
G PP G F P G GPPP G G P
Sbjct: 374 APG-------NFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPP 426
Query: 411 XGG 403
GG
Sbjct: 427 QGG 429
Score = 28.3 bits (60), Expect = 8.1
Identities = 28/83 (33%), Positives = 29/83 (34%), Gaps = 1/83 (1%)
Frame = +3
Query: 402 APXG-GXPXXXXPXKXXPGGXPXGKXLXPPXGGKXGXXXXPPPPPXXXKXGGXIXKKXXF 578
AP G G P P PGG PP GG G PPPP GG +
Sbjct: 399 APQGPGGPGGYGPPP--PGGPGAPGSYGPPQGGPGG--FGPPPP------GG----PGAY 444
Query: 579 XPPPXKXXFXGXPPKFXXKXXGG 647
PPP G PP GG
Sbjct: 445 GPPPTGFPPVGAPPPGAAGAPGG 467
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 483 PPXGGKXGXXXXPPPPPXXXKXGGXIXKKXXFXPPP 590
PP GG G PPPPP G + PPP
Sbjct: 664 PPPGGLGGFMPPPPPPPPMP---GDLSSLLAAAPPP 696
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 7/60 (11%)
Frame = -3
Query: 708 PPTDPXKXXPPXXXGXG----FFXXPPXFXXKIXGG---PPXXFXFXGGXKXXFFXKXPP 550
PP PP G G F PP F G PP F GG FF PP
Sbjct: 299 PPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPP 358
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = -3
Query: 786 PPPRGXXXXXPPXKGGPXXVXFPXFSPPTDPXKXXPPXXXGXGFFXXPPXFXXKIXGGPP 607
PPPRG PP G P F PP PP GF PP GGP
Sbjct: 298 PPPRGHFPPPPPHFMGRGMP--PPFMPPPPHFGMGPP----RGFM--PPPHPMMFRGGPY 349
Query: 606 XXF 598
F
Sbjct: 350 PPF 352
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 7/60 (11%)
Frame = -3
Query: 708 PPTDPXKXXPPXXXGXG----FFXXPPXFXXKIXGG---PPXXFXFXGGXKXXFFXKXPP 550
PP PP G G F PP F G PP F GG FF PP
Sbjct: 299 PPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPP 358
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = -3
Query: 786 PPPRGXXXXXPPXKGGPXXVXFPXFSPPTDPXKXXPPXXXGXGFFXXPPXFXXKIXGGPP 607
PPPRG PP G P F PP PP GF PP GGP
Sbjct: 298 PPPRGHFPPPPPHFMGRGMP--PPFMPPPPHFGMGPP----RGFM--PPPHPMMFRGGPY 349
Query: 606 XXF 598
F
Sbjct: 350 PPF 352
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 486 PXGGKXGXXXXPPPPPXXXKXGGXIXKKXXFXPPP 590
P GG G PPPPP GG P P
Sbjct: 20 PSGGGGGCGCAPPPPPACGCGGGAAPPPAYVAPAP 54
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 456 GXPXGKXLXPPXGGKXGXXXXPPPP 530
G P G L PP GG G PPPP
Sbjct: 1553 GPPMG-GLPPPHGGMNGWRGGPPPP 1576
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +1
Query: 433 PPXKXPRGGXPGXKXF-XPPGXEKXGXPXXPPPPP 534
PP + R G PG PPG + P PP PP
Sbjct: 118 PPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPP 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,705,759
Number of Sequences: 27780
Number of extensions: 354592
Number of successful extensions: 1723
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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