Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_I07
         (891 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0710 - 5355277-5355666                                           29   5.0  
05_05_0165 + 22851863-22852566,22852811-22852964,22853112-228532...    29   6.6  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.6  
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    28   8.7  
03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584     28   8.7  
03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964     28   8.7  

>07_01_0710 - 5355277-5355666
          Length = 129

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -2

Query: 725 KAPRFPKGE--RRTGIPVSGQXRNRRAHEGASRGKRLV 618
           + P  P GE   RT    SG+ R RR  EGA  G  LV
Sbjct: 88  RGPLAPAGESRERTSAANSGEGRRRRVAEGARDGSGLV 125


>05_05_0165 +
           22851863-22852566,22852811-22852964,22853112-22853261,
           22853769-22853930,22854070-22854242,22854330-22854396,
           22854556-22854722,22855216-22855374,22856187-22856276,
           22856392-22856483,22856587-22856681,22857328-22857405,
           22858364-22858459,22859132-22859206,22859290-22859381,
           22859462-22859624,22859734-22859794,22860016-22860116,
           22860567-22860614
          Length = 908

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
 Frame = -2

Query: 404 SPQPNDRAQRVS----ERGSGRAPNTQTASPRGVGRFINAEKTSHTSXLNLK 261
           SP    R+Q VS    ERG G  P T    PRG G    A + +  S L  +
Sbjct: 47  SPSSASRSQSVSTAPLERGVGPGPATSREQPRGGGDLALAAELARLSALRAR 98


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 355 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 510
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +1

Query: 523 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF 663
           CWR  +        T  D Q    +    +KD    P + PSC L+F
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIF 329


>03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584
          Length = 1218

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 144 VVVCPNASMXLSMDWIQXTRXKGRSAAAGTF 52
           V V P   M +S+ W Q +   G  AAAG F
Sbjct: 903 VFVAPPPGMPVSLIWTQKSSLAGEHAAAGNF 933


>03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964
          Length = 1218

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 144 VVVCPNASMXLSMDWIQXTRXKGRSAAAGTF 52
           V V P   M +S+ W Q +   G  AAAG F
Sbjct: 903 VFVAPPPGMPVSLIWTQKSSLAGEHAAAGNF 933


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,239,691
Number of Sequences: 37544
Number of extensions: 504147
Number of successful extensions: 1344
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)