Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_I07
         (891 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060705-1|AAL28253.1|  167|Drosophila melanogaster GH14622p pro...    31   2.1  
AE014298-1577|AAF48013.1|  167|Drosophila melanogaster CG1394-PA...    31   2.1  
AE014296-2674|AAS64988.1|  207|Drosophila melanogaster CG13067-P...    30   4.9  

>AY060705-1|AAL28253.1|  167|Drosophila melanogaster GH14622p
           protein.
          Length = 167

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 617 IPGVSPWKLPRALSCSXPGRLPGYLSAFLP 706
           +PG  P  +P A+S + PG +PG +S  +P
Sbjct: 81  MPGAMPGVMPGAMSGAMPGAMPGAMSCGMP 110


>AE014298-1577|AAF48013.1|  167|Drosophila melanogaster CG1394-PA
           protein.
          Length = 167

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 617 IPGVSPWKLPRALSCSXPGRLPGYLSAFLP 706
           +PG  P  +P A+S + PG +PG +S  +P
Sbjct: 81  MPGAMPGVMPGAMSGAMPGAMPGAMSCGMP 110


>AE014296-2674|AAS64988.1|  207|Drosophila melanogaster CG13067-PB,
           isoform B protein.
          Length = 207

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -1

Query: 711 PEGRKADRYPGKRPGSEQESARGSFQGETPGIFIVLSGFATSDLS--VDF 568
           P+G+ A R P + PGS+     GS  G  P   +   G A+S LS  +DF
Sbjct: 44  PDGQAAHRSPRQHPGSDPRPPGGSEGGAPPE--MATDGEASSSLSKCIDF 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,733,444
Number of Sequences: 53049
Number of extensions: 770481
Number of successful extensions: 1702
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1698
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)