BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_I06
(897 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 180 4e-44
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 77 8e-13
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 73 1e-11
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 71 4e-11
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 70 7e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 69 1e-10
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 65 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 49 1e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 42 0.021
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.086
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 39 0.15
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 38 0.26
UniRef50_A0TUQ0 Cluster: Putative uncharacterized protein precur... 36 1.1
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.9
UniRef50_A2WEI8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.9
UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1; ... 34 5.7
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.7
UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome sh... 33 7.5
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.5
UniRef50_Q4QAI7 Cluster: Putative uncharacterized protein; n=2; ... 33 7.5
UniRef50_Q0V6N5 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 33 9.9
UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1; ... 33 9.9
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 180 bits (438), Expect = 4e-44
Identities = 92/124 (74%), Positives = 95/124 (76%)
Frame = +2
Query: 485 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLXSSLGARSWFR 664
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL + A FR
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL-FR 60
Query: 665 PCRLPDTCPPFSLREAWRFLIAXAVGISVRCRSFAPSWAVCTNPRSARPVRLIXXTIVLS 844
PCRLPDTCPPFSLREAWRFLIA AVGISVRCRSFAPSWAVCTNP + TIVLS
Sbjct: 61 PCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLS 120
Query: 845 QPGK 856
K
Sbjct: 121 PTRK 124
Score = 34.7 bits (76), Expect = 3.2
Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = +1
Query: 628 PGKLPRCALL-----VP-TLPLTGYLSAFLPSGSVALSHSSRCRYLSSV*VVRSKLGCVH 789
P + P CALL +P T P A+ + A+ S RCR + V C +
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAV-----CTN 103
Query: 790 EPPFSPTGAPYPXNYRLESTR*DXT 864
PPFSPT APYP L TR D T
Sbjct: 104 -PPFSPTAAPYPVTIVLSPTRKDTT 127
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 76.6 bits (180), Expect = 8e-13
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +2
Query: 503 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 631
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPL 86
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 72.9 bits (171), Expect = 1e-11
Identities = 38/57 (66%), Positives = 40/57 (70%)
Frame = +2
Query: 509 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLXSSLGARSWFRPCRLP 679
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL + F P LP
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAP-SCALLFLPFGLP 133
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +1
Query: 316 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 414
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 70.9 bits (166), Expect = 4e-11
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +1
Query: 658 VPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 756
VPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 5 VPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 70.1 bits (164), Expect = 7e-11
Identities = 37/78 (47%), Positives = 44/78 (56%)
Frame = -3
Query: 850 GLTQDDSXXDKAHRSG*TGVRAHSPAWSERPTPN*DTYSXSYEKAPRFPKGERRTGIR*A 671
G TQDDS GVRA+SPAWSERP P+ DT S SYEKAPRFPKG++ +
Sbjct: 9 GWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGK 68
Query: 670 AGSEPGARTEGAXQGETP 617
EGA ++P
Sbjct: 69 RQGRNRRAHEGAAGEKSP 86
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/60 (68%), Positives = 42/60 (70%)
Frame = -1
Query: 558 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 379
MLVRGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 64.9 bits (151), Expect = 3e-09
Identities = 44/104 (42%), Positives = 49/104 (47%)
Frame = +2
Query: 578 VRGGETRQDYKDTRRFPLXSSLGARSWFRPCRLPDTCPPFSLREAWRFLIAXAVGISVRC 757
VR GETRQD K L A S P PPFSL + + GIS RC
Sbjct: 23 VRSGETRQDLKIITVSDESLPL-ALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARC 81
Query: 758 RSFAPSWAVCTNPRSARPVRLIXXTIVLSQPGKTRLIATGXSHW 889
RSFAPSWAV NP + T+ LS K+ ATG SHW
Sbjct: 82 RSFAPSWAVSKNPPFSPTAAPYPVTVHLSPTRKSTQNATGSSHW 125
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +1
Query: 292 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 450
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/36 (63%), Positives = 24/36 (66%)
Frame = -3
Query: 856 LTGLTQDDSXXDKAHRSG*TGVRAHSPAWSERPTPN 749
L G TQDDS + GVRAHSPAWSERPTPN
Sbjct: 7 LPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 94 DPDMIRYIDEFGQTTTRMQ 150
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +2
Query: 218 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 340
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 41.9 bits (94), Expect = 0.021
Identities = 21/32 (65%), Positives = 21/32 (65%)
Frame = +3
Query: 795 PVQPDRCALSX*LSS*VNPVRXDLLPLGXATG 890
PVQPDRCALS NPVR DL PL ATG
Sbjct: 5 PVQPDRCALSGNYRLESNPVRHDLSPLAAATG 36
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.086
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 362 ERGSGRAPNTQTASPRALADSLMQ 291
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 39.1 bits (87), Expect = 0.15
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +2
Query: 452 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 631
I +R + + + P T F S PLT+ITKI Q + +T+ +YK T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 632 XS 637
S
Sbjct: 104 QS 105
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 38.3 bits (85), Expect = 0.26
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = -3
Query: 850 GLTQDDSXXDKAHRSG*TGVRAHSPAWSERPTPN*DT 740
G TQ +S + GV A+SPAWSERPTP+ DT
Sbjct: 9 GWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_A0TUQ0 Cluster: Putative uncharacterized protein
precursor; n=1; Burkholderia cenocepacia MC0-3|Rep:
Putative uncharacterized protein precursor -
Burkholderia cenocepacia MC0-3
Length = 559
Score = 36.3 bits (80), Expect = 1.1
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = -1
Query: 810 GRAERGFVHTAQLGANDLHRTEIPTAXAMRKRHASRR---EKGGQVSGKRQGRNQERAPR 640
G ER AQ G HR E R+R A+R+ + GG+ +R R + RAP
Sbjct: 194 GARERCLAQPAQFGGEIPHRAEQLAVRQRRRRRAARQPQHDHGGERDERRDRRGEHRAPA 253
Query: 639 EL 634
E+
Sbjct: 254 EI 255
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.5 bits (78), Expect = 1.9
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -1
Query: 585 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIPLILWITVLPPL 415
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 414 SELIPL 397
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_A2WEI8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia dolosa AUO158|Rep: Putative uncharacterized
protein - Burkholderia dolosa AUO158
Length = 390
Score = 35.5 bits (78), Expect = 1.9
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -1
Query: 822 IRRTGRAER---GFVHTAQLGANDLHRTEIPTAXAMRKRHASRREKGGQVSGKRQGRNQE 652
+RR GR +R G V + +D R + A R RH R ++ Q+ G+R+ Q
Sbjct: 185 VRRNGRRDRRQRGAVDARRRHPSDARRAQRAGAGQRRARHGRRHDRRRQLPGRRRAEPQR 244
Query: 651 RAPRELXR 628
R+L R
Sbjct: 245 ADHRQLAR 252
>UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1;
Adineta vaga|Rep: Putative uncharacterized protein -
Adineta vaga
Length = 400
Score = 33.9 bits (74), Expect = 5.7
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = -3
Query: 625 ETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPP 446
E GIF GF + L +D C + GG A +T + G+W + G L C+ + PP
Sbjct: 247 EGGGIF-KRKGFYYTMLGIDCCFCQWGGDA--RTFISNNPLGNWTYFGQLNYCADGKAPP 303
Query: 445 DSVD 434
D +D
Sbjct: 304 DHID 307
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.7
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 252 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 88
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF15018, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 754
Score = 33.5 bits (73), Expect = 7.5
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 419 GGNTVIHRIRGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETR 598
GG+ V ++GI+ ERT + +P + PR W S+ P + +++GG+ R
Sbjct: 611 GGHGVPGELQGIS-ERTLLELTRGKP-LLSHPRAWFVSLDGKPAAQVRHSIIELQGGQRR 668
Query: 599 QDYKDT 616
DT
Sbjct: 669 PSSNDT 674
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.5
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2
Query: 425 NTVIHRIRGITQERTCE 475
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_Q4QAI7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 538
Score = 33.5 bits (73), Expect = 7.5
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +1
Query: 550 DEHHKNRRSSQRWRNPTGL*RYQAFPPGKLPRCALLVPTLP 672
D + RRS RNPT R F PG PR +PTLP
Sbjct: 140 DAQTRGRRSPLISRNPTLCPRSVLFVPGSKPRALAKIPTLP 180
>UniRef50_Q0V6N5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 541
Score = 33.5 bits (73), Expect = 7.5
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = -1
Query: 852 PG*LKTIVXXIRRTGRAERGFVHTAQLGANDLHRTEIPTAXAMRKRHASRREKGGQVSGK 673
PG KT + TGR RG T L + + T A+R+R + R G + +
Sbjct: 41 PGSRKTPLLRTPGTGRTPRGGPATRPLPSRRVAPTTPHAIRALRERANAARTPGN--NRR 98
Query: 672 RQGRNQERAPRELXR 628
R GR Q PR++ R
Sbjct: 99 RSGRVQRETPRDILR 113
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 33.1 bits (72), Expect = 9.9
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = -1
Query: 726 MRKRHASRREKGGQVSGKRQGRNQERAPRELXRGKR 619
+R+R A RR GG+ G+R+GRN++R + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQQ---RGQR 387
>UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 183
Score = 33.1 bits (72), Expect = 9.9
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -1
Query: 558 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAA 388
ML A+ + + ++ GL G+ L C H+++ + L ++P L ++I + A
Sbjct: 1 MLYTAAQTLSRGRKSGLMAAFGIFLGGCFHIIAASLGLTTIFQIIPKLYDIIKILGA 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 858,387,471
Number of Sequences: 1657284
Number of extensions: 17768168
Number of successful extensions: 49354
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 46764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49307
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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