Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_I06
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0156 - 1233431-1233925                                           29   6.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.8  
10_05_0078 + 8891364-8891529,8891535-8891797                           28   8.8  
01_03_0015 + 11669321-11670070                                         28   8.8  

>08_01_0156 - 1233431-1233925
          Length = 164

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = -1

Query: 774 LGANDLHRTEIPTAXAMRKRHASRREK---GGQVSGKRQGRNQERAPRELXRGKRLVSL* 604
           LG  D   TE+  A A     A+R E+   GG   G+  GR + R  RE  +G     + 
Sbjct: 89  LGDADATATEVDAAAAAEAEAAARGERGDGGGDGGGRAGGRGRARDERE--KGAAADRVL 146

Query: 603 SCRVSPPLT 577
             R SP ++
Sbjct: 147 GVRASPTVS 155


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 298 NESAN---ARGEAVCVLGALPLPRSLTRCAR 381
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>10_05_0078 + 8891364-8891529,8891535-8891797
          Length = 142

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 610 RYQAFPPGKLPRCALLVPTLPLTGYLSAFLPS 705
           R+     G  P CA L P +P+ G L  F+PS
Sbjct: 82  RFHELDFGCGPPCAFLPPDVPVEGILMIFVPS 113


>01_03_0015 + 11669321-11670070
          Length = 249

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +3

Query: 552 RASQKSTLKSEVAKPDRTIKIPGVSPWXAPSVRAPGSDPAAYRIP 686
           RA  ++   ++ A+P+  I I G     APSV A GS PA  R+P
Sbjct: 189 RADVEAPYDADGAQPEVRIDIAG----DAPSVAAKGSAPAMGRLP 229


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,094,747
Number of Sequences: 37544
Number of extensions: 534157
Number of successful extensions: 1584
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1584
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)