Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_I05
         (954 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q72MW5 Cluster: Acriflavin resistance; n=2; Leptospira ...    35   2.7  

>UniRef50_Q72MW5 Cluster: Acriflavin resistance; n=2; Leptospira
            interrogans|Rep: Acriflavin resistance - Leptospira
            interrogans serogroup Icterohaemorrhagiae
            serovarcopenhageni
          Length = 1083

 Score = 35.1 bits (77), Expect = 2.7
 Identities = 21/53 (39%), Positives = 30/53 (56%)
 Frame = -2

Query: 524  SLIGALHLINIATKLKVLRVSFLNRDRASMGSQVVERFINWGRFLLRSKIVRS 366
            S+IG + LI +ATK  +L V F N+   S G ++ E  I  GR  LR  ++ S
Sbjct: 966  SMIGLIMLIGVATKNSILLVDFTNQ-LLSQGKEMKEAIIEAGRERLRPILMTS 1017


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,403,446
Number of Sequences: 1657284
Number of extensions: 10515430
Number of successful extensions: 30157
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 29155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30128
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 88182286632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)