Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_I02
(925 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 178 1e-43
UniRef50_Q51612 Cluster: Putative uncharacterized protein; n=3; ... 127 3e-28
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 123 7e-27
UniRef50_Q4E8I3 Cluster: Putative uncharacterized protein; n=1; ... 82 2e-14
UniRef50_A5ZYT9 Cluster: Putative uncharacterized protein; n=1; ... 68 3e-10
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 58 4e-07
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 57 6e-07
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 54 7e-06
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 53 1e-05
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 52 3e-05
UniRef50_A4LA79 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 42 0.017
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 38 0.27
UniRef50_Q51776 Cluster: Replication initiator protein; n=1; Esc... 36 1.1
UniRef50_A2GB68 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 178 bits (434), Expect = 1e-43
Identities = 80/81 (98%), Positives = 80/81 (98%)
Frame = +1
Query: 328 PPXQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGYTRR 507
PP QPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGYTRR
Sbjct: 4 PPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGYTRR 63
Query: 508 TVFGICALLKPVTFGKRVGSS 570
TVFGICALLKPVTFGKRVGSS
Sbjct: 64 TVFGICALLKPVTFGKRVGSS 84
>UniRef50_Q51612 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Plasmid
ColE1
Length = 96
Score = 127 bits (307), Expect = 3e-28
Identities = 61/66 (92%), Positives = 63/66 (95%)
Frame = -2
Query: 654 LRSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQSADTKYCSSSVAVVRPPL 475
+RSFFSARNLLLANKKTTAT+GGLFAGSRATNSFSEGNWLQQSADTKYC SSVAVV P L
Sbjct: 1 MRSFFSARNLLLANKKTTATNGGLFAGSRATNSFSEGNWLQQSADTKYCPSSVAVVGPLL 60
Query: 474 QELCST 457
QELCST
Sbjct: 61 QELCST 66
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 123 bits (296), Expect = 7e-27
Identities = 62/95 (65%), Positives = 65/95 (68%)
Frame = +1
Query: 58 RFSIGSAPLXEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLXALSXFRPCRLPDTCPPFSL 237
RFSIGSAPL K + + FP + AL FRPCRLPDTCPPFSL
Sbjct: 15 RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCAL-LFRPCRLPDTCPPFSL 73
Query: 238 REAWRFLIAHAVGISVRCRSFAPSWAVCTNPPXQP 342
REAWRFLIAHAVGISVRCRSFAPSWAVCTNPP P
Sbjct: 74 REAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
Score = 99.5 bits (237), Expect = 1e-19
Identities = 62/109 (56%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Frame = +2
Query: 80 PXTSITKIDAQVRGGETRQDYKDTRRFPLEXXXXXXXXXXXXXYRIPVRLSPFGKRGAFS 259
P TSITKIDAQVRGGETRQDYKDTRRFPLE R+P PF R A+
Sbjct: 22 PLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPC---RLPDTCPPFSLREAWR 78
Query: 260 *LTL*VSQFGVG-RSLQAGLCART-PRFSPTAAPYPVTIVLSPTR*DTT 400
L V RS T P FSPTAAPYPVTIVLSPTR DTT
Sbjct: 79 FLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPTRKDTT 127
>UniRef50_Q4E8I3 Cluster: Putative uncharacterized protein; n=1;
Wolbachia endosymbiont of Drosophila ananassae|Rep:
Putative uncharacterized protein - Wolbachia
endosymbiont of Drosophila ananassae
Length = 63
Score = 82.2 bits (194), Expect = 2e-14
Identities = 47/64 (73%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
Frame = +2
Query: 476 SGGLTTA-TLEEQYLVSALC*SQLPSEKELVALDPANKPPLVAVVFLFASSRLRAEKKDL 652
SGGLTT T + + AL + SEKELVALDPANKPPLVAVVFLFASSRLRAEKKDL
Sbjct: 1 SGGLTTEYTRRTVFGICALL-KPVTSEKELVALDPANKPPLVAVVFLFASSRLRAEKKDL 59
Query: 653 KXIL 664
K IL
Sbjct: 60 KKIL 63
>UniRef50_A5ZYT9 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 76
Score = 68.1 bits (159), Expect = 3e-10
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +2
Query: 560 LVALDPANKPPLVAVVFLFASSRLRAEKKDLKXIL 664
+VALDPANKPPLVAVVFLFASSRLRAEKKDLK IL
Sbjct: 1 MVALDPANKPPLVAVVFLFASSRLRAEKKDLKKIL 35
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 57.6 bits (133), Expect = 4e-07
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = -2
Query: 318 HSPAWSERPTPN*DTYSVSYEKAPRFPKGER 226
+SPAWSERP P+ DT SVSYEKAPRFPKG++
Sbjct: 31 YSPAWSERPKPSRDTSSVSYEKAPRFPKGKK 61
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = -1
Query: 409 VAISRVLPGWTQDDSYRIRRSGRAEXGGSCTQPSLERTTYTELRYLQREL*ESATLPEGR 230
+A RV PGWTQDDSYR RS RAE G P+ ++ P+G+
Sbjct: 1 MAFLRVRPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGK 60
Query: 229 KADR 218
KA++
Sbjct: 61 KAEQ 64
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 57.2 bits (132), Expect = 6e-07
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 80 PXTSITKIDAQVRGGETRQDYKDTRRFPL 166
P TSITK DAQ+ GGETRQDYKDTRRFPL
Sbjct: 58 PLTSITKSDAQISGGETRQDYKDTRRFPL 86
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 56.4 bits (130), Expect = 1e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 213 GYLSAFLPSGSVALSHSSRCRYLSSV 290
GYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 12 GYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 53.6 bits (123), Expect = 7e-06
Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = -1
Query: 409 VAISRVLPGWTQDDSYRIRRSGRAEXGGSCTQPS-LERTT 293
+A+ R LPGWTQDDSYRIRRSGRAE G P+ ER T
Sbjct: 1 MALRRALPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPT 40
Score = 33.5 bits (73), Expect = 7.8
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2
Query: 318 HSPAWSERPTPN 283
HSPAWSERPTPN
Sbjct: 31 HSPAWSERPTPN 42
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = +2
Query: 80 PXTSITKIDAQVRGGETRQDYKDTRRFPL 166
P TSI K DAQ+ GGETRQDYKD RRFPL
Sbjct: 90 PLTSIAKSDAQISGGETRQDYKDPRRFPL 118
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 51.6 bits (118), Expect = 3e-05
Identities = 27/54 (50%), Positives = 29/54 (53%)
Frame = +1
Query: 181 ALSXFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPXQP 342
ALS P PPFSL + + GIS RCRSFAPSWAV NPP P
Sbjct: 45 ALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSP 98
Score = 43.6 bits (98), Expect = 0.007
Identities = 39/99 (39%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +2
Query: 113 VRGGETRQDYKDTRRFPLEXXXXXXXXXXXXXYRIPVRLSPFGKRGAFS*LTL*VSQFGV 292
VR GETRQD K E RIPV PF G+ + S G+
Sbjct: 23 VRSGETRQDLKIITVSD-ESLPLALSCSNPAVSRIPV--PPFSLAGSVA--LSHSSHSGI 77
Query: 293 G---RSLQAGLC-ARTPRFSPTAAPYPVTIVLSPTR*DT 397
RS ++ P FSPTAAPYPVT+ LSPTR T
Sbjct: 78 SARCRSFAPSWAVSKNPPFSPTAAPYPVTVHLSPTRKST 116
>UniRef50_A4LA79 Cluster: Putative uncharacterized protein; n=1;
Edwardsiella tarda|Rep: Putative uncharacterized protein
- Edwardsiella tarda
Length = 142
Score = 46.4 bits (105), Expect = 0.001
Identities = 27/47 (57%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +1
Query: 496 YTRRTVFGICALLKPVTFGKRVGSS--*SGKQTTAGSGGFFVCKQQI 630
YT RT FG C L KPVT RVGSS S +QT GSGGFF ++I
Sbjct: 17 YTERTEFGDCVLPKPVTSVLRVGSSKEPSIEQTIVGSGGFFFSGKKI 63
>UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1;
Edwardsiella tarda|Rep: Putative uncharacterized protein
- Edwardsiella tarda
Length = 99
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +2
Query: 305 QAGLCARTPRFSPTAAPYPVTIVLSPTR*DTTYRHWQ 415
QAG C +P FSPT P VT++L+PT DT RHW+
Sbjct: 64 QAGFCTNSP-FSPTITPVQVTVLLNPTLTDTQKRHWR 99
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 42.3 bits (95), Expect = 0.017
Identities = 22/40 (55%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -1
Query: 409 VAISRVLPGWTQDDSYRIRRSGRAEXGGSCTQPS-LERTT 293
+A R PGWTQ +SYRIRRS RAE G P+ ER T
Sbjct: 1 MAFYRAFPGWTQVNSYRIRRSSRAERGVLAYSPAWSERPT 40
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 38.3 bits (85), Expect = 0.27
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 50 LLGVFP*APPPXTSITKIDAQVRGGETRQDYKDTRRFPLE 169
L +FP PP T+ITKI Q + +T+ +YK T FPL+
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQ 104
>UniRef50_Q51776 Cluster: Replication initiator protein; n=1;
Escherichia coli|Rep: Replication initiator protein -
Escherichia coli
Length = 23
Score = 36.3 bits (80), Expect = 1.1
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 674 LRGLTLSGTKTHVKGF 721
+RGLTLSGTKTHVKGF
Sbjct: 6 MRGLTLSGTKTHVKGF 21
>UniRef50_A2GB68 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 672
Score = 33.5 bits (73), Expect = 7.8
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -2
Query: 672 KDQRIXLRSFFSARNLLLANKK-TTATSGGLFAGSRATNSFSEGNWLQQSADTKYCSSSV 496
+D+ LR S++N +A+ + T + NS N Q + YCSSS+
Sbjct: 594 EDEITLLRQALSSKNREIASLEYKTGKISAKYINMPNNNSEQPTNDAHQQTEISYCSSSM 653
Query: 495 AVVRPPLQE 469
V+ PLQE
Sbjct: 654 TNVKKPLQE 662
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,643,924
Number of Sequences: 1657284
Number of extensions: 16018419
Number of successful extensions: 38247
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 36778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38232
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84851082477
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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