Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_H24
         (948 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.5  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    24   7.7  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   7.7  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 735  IGAGPSTFTTVIGSVAIGTNCTDSDGDKFIWAALSGTWAP 616
            +G G S  T++  ++ +GT  T +    F+ AA SGTW P
Sbjct: 2799 VGMGLSLSTSI--AIMVGTGITFA---YFMMAASSGTWDP 2833


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +2

Query: 455 QVHHYEVHEFTDERLGPASPPYEEMLAASADHYQRY--AVPPK 577
           Q H YEVH  ++E  G       ++ +   D YQ +  A+ PK
Sbjct: 365 QKHEYEVHRISNENFGIKCTICHKLFSQRQD-YQLHMRAIHPK 406


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +2

Query: 629 PLKAAQINLSPSESVQFVPIATDPITVVNVDGPAPIHSG 745
           P+K    NL  S S    P    P  + N++ P  I+SG
Sbjct: 202 PVKPKARNLLSSVSTTPSPEVFSPKKMENIESPPSIYSG 240


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 823,519
Number of Sequences: 2352
Number of extensions: 16182
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103776201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)