Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_H22
         (882 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.4  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   2.4  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            23   2.4  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.5  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -3

Query: 505 LLFFEEGVNLLKVLH*LIIR 446
           L++F+E VN L++LH + IR
Sbjct: 192 LIWFDEVVNELRILHGVEIR 211


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +2

Query: 509 LCRVALIVGLGLTVAFCWKFIAILLYVADN*F-SRLK 616
           LC+  L+  + +   F W FI + + +    F  RLK
Sbjct: 85  LCKAILVHAITIRSTFSWTFIDVFIMLTSTAFVFRLK 121


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 490 PRRIAVPLQGCPDSWFGSYSSILLEIHSDSPVCSGQL 600
           P   A+P++GC ++ F +    + E  +  P  SG +
Sbjct: 45  PHPAALPIEGCNETGFINSQPSMAEFMTALPHLSGDM 81


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 490 PRRIAVPLQGCPDSWFGSYSSILLEIHSDSPVCSGQL 600
           P   A+P++GC ++ F +    + E  +  P  SG +
Sbjct: 45  PHPAALPIEGCNETGFINSQPSMAEFMTALPHLSGDM 81


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +3

Query: 150  CTPNATSTIAPS 185
            C P+A+ST+APS
Sbjct: 2284 CHPDASSTMAPS 2295


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 150 CTPNATSTI 176
           CTPNAT+T+
Sbjct: 140 CTPNATNTV 148


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 150 CTPNATSTI 176
           CTPNAT+T+
Sbjct: 140 CTPNATNTV 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,265
Number of Sequences: 336
Number of extensions: 3945
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)