Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_H22
(882 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY128434-1|AAM75027.1| 793|Drosophila melanogaster LD02105p pro... 137 2e-32
AE014296-258|AAF47500.2| 793|Drosophila melanogaster CG12084-PA... 137 2e-32
AY069430-1|AAL39575.1| 514|Drosophila melanogaster LD13917p pro... 31 2.1
AJ237997-1|CAB40789.1| 514|Drosophila melanogaster importin alp... 31 2.1
AF230873-1|AAF37856.1| 514|Drosophila melanogaster importin alp... 31 2.1
AF230872-1|AAF37855.1| 514|Drosophila melanogaster importin alp... 31 2.1
AF230871-1|AAK14941.1| 514|Drosophila melanogaster importin alp... 31 2.1
AF152928-1|AAD37442.1| 514|Drosophila melanogaster karyopherin ... 31 2.1
AF074958-1|AAC26056.1| 514|Drosophila melanogaster karyopherin ... 31 2.1
AE014297-979|AAO41526.1| 514|Drosophila melanogaster CG9423-PC,... 31 2.1
AE014297-978|AAN13435.1| 514|Drosophila melanogaster CG9423-PB,... 31 2.1
AE014297-977|AAF54408.1| 514|Drosophila melanogaster CG9423-PA,... 31 2.1
>AY128434-1|AAM75027.1| 793|Drosophila melanogaster LD02105p
protein.
Length = 793
Score = 137 bits (332), Expect = 2e-32
Identities = 57/87 (65%), Positives = 71/87 (81%)
Frame = +2
Query: 137 ERWDLHAERNINYRSFEPILSLLHAHHTPQCQHWAVWALANLTTVYPEKYCNLVEAEGGL 316
+RW++ +ERNINYRSFEPILSL+ + TPQCQHWAVWALANLT VYPEKYC LVE E G+
Sbjct: 696 QRWNIKSERNINYRSFEPILSLVRCYETPQCQHWAVWALANLTQVYPEKYCKLVEQENGI 755
Query: 317 RLLNILLNHPAPYDQIKNLACIVINNC 397
++LN L+ H +PY +IK +A +VI C
Sbjct: 756 QILNELIEHESPYCEIKRIARLVIEQC 782
>AE014296-258|AAF47500.2| 793|Drosophila melanogaster CG12084-PA
protein.
Length = 793
Score = 137 bits (332), Expect = 2e-32
Identities = 57/87 (65%), Positives = 71/87 (81%)
Frame = +2
Query: 137 ERWDLHAERNINYRSFEPILSLLHAHHTPQCQHWAVWALANLTTVYPEKYCNLVEAEGGL 316
+RW++ +ERNINYRSFEPILSL+ + TPQCQHWAVWALANLT VYPEKYC LVE E G+
Sbjct: 696 QRWNIKSERNINYRSFEPILSLVRCYETPQCQHWAVWALANLTQVYPEKYCKLVEQENGI 755
Query: 317 RLLNILLNHPAPYDQIKNLACIVINNC 397
++LN L+ H +PY +IK +A +VI C
Sbjct: 756 QILNELIEHESPYCEIKRIARLVIEQC 782
>AY069430-1|AAL39575.1| 514|Drosophila melanogaster LD13917p
protein.
Length = 514
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 188 PIL-SLLHAHHTPQCQHWAVWALANLTTVYPEKYCNLVEAEGGLRLLNILLNHPAP 352
PIL L H+ Q A WAL N+ + + N V A G + L LLN PAP
Sbjct: 112 PILVECLKQHNHTMLQFEAAWALTNIASGTSAQ-TNEVVAAGAVPLFLQLLNSPAP 166
>AJ237997-1|CAB40789.1| 514|Drosophila melanogaster importin
alpha-3 protein.
Length = 514
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 188 PIL-SLLHAHHTPQCQHWAVWALANLTTVYPEKYCNLVEAEGGLRLLNILLNHPAP 352
PIL L H+ Q A WAL N+ + + N V A G + L LLN PAP
Sbjct: 112 PILVECLKQHNHTMLQFEAAWALTNIASGTSAQ-TNEVVAAGAVPLFLQLLNSPAP 166
>AF230873-1|AAF37856.1| 514|Drosophila melanogaster importin alpha
3 protein.
Length = 514
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 188 PIL-SLLHAHHTPQCQHWAVWALANLTTVYPEKYCNLVEAEGGLRLLNILLNHPAP 352
PIL L H+ Q A WAL N+ + + N V A G + L LLN PAP
Sbjct: 112 PILVECLKQHNHTMLQFEAAWALTNIASGTSAQ-TNEVVAAGAVPLFLQLLNSPAP 166
>AF230872-1|AAF37855.1| 514|Drosophila melanogaster importin alpha
3 protein.
Length = 514
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 188 PIL-SLLHAHHTPQCQHWAVWALANLTTVYPEKYCNLVEAEGGLRLLNILLNHPAP 352
PIL L H+ Q A WAL N+ + + N V A G + L LLN PAP
Sbjct: 112 PILVECLKQHNHTMLQFEAAWALTNIASGTSAQ-TNEVVAAGAVPLFLQLLNSPAP 166
>AF230871-1|AAK14941.1| 514|Drosophila melanogaster importin alpha
3 protein.
Length = 514
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 188 PIL-SLLHAHHTPQCQHWAVWALANLTTVYPEKYCNLVEAEGGLRLLNILLNHPAP 352
PIL L H+ Q A WAL N+ + + N V A G + L LLN PAP
Sbjct: 112 PILVECLKQHNHTMLQFEAAWALTNIASGTSAQ-TNEVVAAGAVPLFLQLLNSPAP 166
>AF152928-1|AAD37442.1| 514|Drosophila melanogaster karyopherin
alpha 3 protein.
Length = 514
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 188 PIL-SLLHAHHTPQCQHWAVWALANLTTVYPEKYCNLVEAEGGLRLLNILLNHPAP 352
PIL L H+ Q A WAL N+ + + N V A G + L LLN PAP
Sbjct: 112 PILVECLKQHNHTMLQFEAAWALTNIASGTSAQ-TNEVVAAGAVPLFLQLLNSPAP 166
>AF074958-1|AAC26056.1| 514|Drosophila melanogaster karyopherin
alpha 3 protein.
Length = 514
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 188 PIL-SLLHAHHTPQCQHWAVWALANLTTVYPEKYCNLVEAEGGLRLLNILLNHPAP 352
PIL L H+ Q A WAL N+ + + N V A G + L LLN PAP
Sbjct: 112 PILVECLKQHNHTMLQFEAAWALTNIASGTSAQ-TNEVVAAGAVPLFLQLLNSPAP 166
>AE014297-979|AAO41526.1| 514|Drosophila melanogaster CG9423-PC,
isoform C protein.
Length = 514
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 188 PIL-SLLHAHHTPQCQHWAVWALANLTTVYPEKYCNLVEAEGGLRLLNILLNHPAP 352
PIL L H+ Q A WAL N+ + + N V A G + L LLN PAP
Sbjct: 112 PILVECLKQHNHTMLQFEAAWALTNIASGTSAQ-TNEVVAAGAVPLFLQLLNSPAP 166
>AE014297-978|AAN13435.1| 514|Drosophila melanogaster CG9423-PB,
isoform B protein.
Length = 514
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 188 PIL-SLLHAHHTPQCQHWAVWALANLTTVYPEKYCNLVEAEGGLRLLNILLNHPAP 352
PIL L H+ Q A WAL N+ + + N V A G + L LLN PAP
Sbjct: 112 PILVECLKQHNHTMLQFEAAWALTNIASGTSAQ-TNEVVAAGAVPLFLQLLNSPAP 166
>AE014297-977|AAF54408.1| 514|Drosophila melanogaster CG9423-PA,
isoform A protein.
Length = 514
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 188 PIL-SLLHAHHTPQCQHWAVWALANLTTVYPEKYCNLVEAEGGLRLLNILLNHPAP 352
PIL L H+ Q A WAL N+ + + N V A G + L LLN PAP
Sbjct: 112 PILVECLKQHNHTMLQFEAAWALTNIASGTSAQ-TNEVVAAGAVPLFLQLLNSPAP 166
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,443,277
Number of Sequences: 53049
Number of extensions: 753627
Number of successful extensions: 1878
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1877
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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