Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_H21
(909 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117; Eukar... 141 2e-32
UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27; Euka... 130 5e-29
UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=... 116 1e-24
UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal ... 108 2e-22
UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole gen... 108 2e-22
UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillar... 107 3e-22
UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17; ... 87 6e-16
UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19; ... 83 7e-15
UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2; A... 80 9e-14
UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=... 77 8e-13
UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7; A... 77 8e-13
UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13 prot... 75 3e-12
UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1; Encepha... 74 4e-12
UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1; Cenar... 71 3e-11
UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1; Can... 68 4e-10
UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4; T... 58 3e-07
UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultu... 58 4e-07
UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6; H... 50 6e-05
UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 - R... 38 0.27
UniRef50_Q8FV54 Cluster: Ribose ABC transporter, periplasmic D-r... 36 1.9
UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7; E... 35 2.5
UniRef50_A5DK33 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
>UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117;
Eukaryota|Rep: 40S ribosomal protein S13 - Homo sapiens
(Human)
Length = 151
Score = 141 bits (342), Expect = 2e-32
Identities = 64/72 (88%), Positives = 70/72 (97%)
Frame = +3
Query: 336 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 515
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 516 VLPPNWKYESST 551
VLPPNWKYESST
Sbjct: 134 VLPPNWKYESST 145
Score = 119 bits (287), Expect = 9e-26
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +2
Query: 155 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 334
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
>UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27;
Eukaryota|Rep: 40S ribosomal protein S13-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 151
Score = 130 bits (314), Expect = 5e-29
Identities = 62/86 (72%), Positives = 71/86 (82%)
Frame = +3
Query: 294 LPK*DS*LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 473
+P+ S + I+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVE
Sbjct: 60 IPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVE 119
Query: 474 SRIHRLARYYKTKSVLPPNWKYESST 551
SRIHRLARYYK LPP WKYES+T
Sbjct: 120 SRIHRLARYYKKTKKLPPVWKYESTT 145
Score = 92.7 bits (220), Expect = 1e-17
Identities = 43/60 (71%), Positives = 48/60 (80%)
Frame = +2
Query: 155 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 334
SALPY+RS P+WLK T DV E I K KKGLTPSQIGV+LRDSHG+ QV+ VTG KILR
Sbjct: 14 SALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILR 73
>UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=39;
Eukaryota|Rep: 40S ribosomal protein S13, putative -
Leishmania major
Length = 151
Score = 116 bits (278), Expect = 1e-24
Identities = 51/72 (70%), Positives = 61/72 (84%)
Frame = +3
Query: 336 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 515
I+K GLAP++PEDLY+L+K+A MRKHLER+ D+D+K+RLILVESRIHRLARYYK
Sbjct: 74 ILKHNGLAPEIPEDLYFLVKRATQMRKHLERHTTDRDTKYRLILVESRIHRLARYYKRVK 133
Query: 516 VLPPNWKYESST 551
LPP WKYESST
Sbjct: 134 QLPPTWKYESST 145
Score = 77.8 bits (183), Expect = 4e-13
Identities = 35/60 (58%), Positives = 47/60 (78%)
Frame = +2
Query: 155 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 334
SALPYRR+ P WLK+ + +V + + K +KG+ PSQIG+ LRDS G+AQV+ VTG+KILR
Sbjct: 14 SALPYRRTPPAWLKIASRNVVKMVCKSSRKGMMPSQIGMELRDSMGIAQVKNVTGRKILR 73
>UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal
protein S13; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S13 - Rattus norvegicus
Length = 131
Score = 108 bits (260), Expect = 2e-22
Identities = 51/65 (78%), Positives = 57/65 (87%)
Frame = +3
Query: 351 GLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPN 530
GLA DLP DLY+LIKKAVA++KHLERNRKDKD+KF L L ESRIH LARY KTK +LPP+
Sbjct: 59 GLALDLPGDLYHLIKKAVAVQKHLERNRKDKDAKFCLSLTESRIHPLARYCKTKRMLPPS 118
Query: 531 WKYES 545
WKYES
Sbjct: 119 WKYES 123
Score = 79.4 bits (187), Expect = 1e-13
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = +2
Query: 155 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVA 298
S LPY SV WLK T+DD+KEQIYKL KKGLTPSQIGV LRD+HG+A
Sbjct: 14 SVLPYHHSVLMWLKSTSDDMKEQIYKLAKKGLTPSQIGVTLRDTHGLA 61
>UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_187, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 129
Score = 108 bits (260), Expect = 2e-22
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = +3
Query: 354 LAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNW 533
L P++PEDLY+LIKKAVA+RKHLER+RKDKDSKFRLI+VESRIHRLARYYK LPP W
Sbjct: 69 LGPEIPEDLYHLIKKAVAIRKHLERSRKDKDSKFRLIVVESRIHRLARYYKRTKKLPPVW 128
Query: 534 K 536
K
Sbjct: 129 K 129
>UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillardia
theta|Rep: 40S ribosomal protein S13 - Guillardia theta
(Cryptomonas phi)
Length = 147
Score = 107 bits (258), Expect = 3e-22
Identities = 46/71 (64%), Positives = 61/71 (85%)
Frame = +3
Query: 336 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 515
I+K GL P++PEDL++LIKKA+ ++KHLERN+KDKDSKFRLIL ES+IHRL+RYYK
Sbjct: 71 ILKKNGLNPEIPEDLFFLIKKAINIKKHLERNKKDKDSKFRLILTESKIHRLSRYYKRIQ 130
Query: 516 VLPPNWKYESS 548
+P NW+++SS
Sbjct: 131 RIPINWRFDSS 141
Score = 60.1 bits (139), Expect = 8e-08
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = +2
Query: 155 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 334
S +P+ R+ P W+K + + + E I L KKGL PSQIG LRDS G+ V+ + G+ I++
Sbjct: 11 SLIPFERNAPLWVKDSKEKINEIICNLAKKGLVPSQIGSYLRDSAGIPLVKNIAGRNIVK 70
>UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17;
Euryarchaeota|Rep: 30S ribosomal protein S15P/S13e -
Methanococcus jannaschii
Length = 153
Score = 87.0 bits (206), Expect = 6e-16
Identities = 41/77 (53%), Positives = 55/77 (71%)
Frame = +3
Query: 321 KRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARY 500
K+ S IMK GL P +PEDL L+++AV +RKHLE++ KD SK L L+ES+I RL +Y
Sbjct: 69 KKISKIMKEHGLYPKVPEDLLNLMRRAVNLRKHLEQHPKDLHSKRGLQLIESKIRRLVKY 128
Query: 501 YKTKSVLPPNWKYESST 551
YK+K VLP +W+Y T
Sbjct: 129 YKSKGVLPADWRYTPET 145
Score = 62.5 bits (145), Expect = 1e-08
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = +2
Query: 155 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 328
S P R+ VP W++ T + V++ + +L KKG +QIG++LRD++G+ V+ +TGKKI
Sbjct: 14 SKRPVRKEVPEWVQYTPEQVEQLVVELAKKGYQSAQIGLILRDTYGIPDVKLITGKKI 71
>UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Pyrococcus abyssi
Length = 158
Score = 83.4 bits (197), Expect = 7e-15
Identities = 37/69 (53%), Positives = 52/69 (75%)
Frame = +3
Query: 336 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 515
I++ GLAP++PEDL +LIK+AV +RKHLE++ KD S L L+ES+I RL +YYK K
Sbjct: 81 ILEKHGLAPEIPEDLMFLIKRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKG 140
Query: 516 VLPPNWKYE 542
LP +W+Y+
Sbjct: 141 KLPKDWRYD 149
Score = 46.8 bits (106), Expect = 8e-04
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +2
Query: 155 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVR 307
S P R + P WL+ T +D++ + KL K+G + + IG +LRD +G+ V+
Sbjct: 14 SKRPPRTAPPIWLEYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGIPTVK 64
>UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Nanoarchaeum equitans
Length = 154
Score = 79.8 bits (188), Expect = 9e-14
Identities = 35/75 (46%), Positives = 49/75 (65%)
Frame = +3
Query: 315 LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLA 494
+ K ++ GL PD+P DL YL+K+A + KH+E N +D +K L+ S+IHRLA
Sbjct: 69 IGKSLQDFLEEKGLLPDIPWDLIYLLKRAYRVYKHIELNPRDTQAKRNYQLIISKIHRLA 128
Query: 495 RYYKTKSVLPPNWKY 539
+YYK K VLP +WKY
Sbjct: 129 KYYKRKGVLPKDWKY 143
Score = 49.6 bits (113), Expect = 1e-04
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +2
Query: 155 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 334
S P R + P W + V+ +I +L K+G +P+ IG++LRD +G+ VR GK +
Sbjct: 16 SKRPLRTTKPEWAPYDKEFVENKIIELAKQGYSPAMIGLILRDQYGIPDVRLYIGKSLQD 75
Query: 335 YHE 343
+ E
Sbjct: 76 FLE 78
>UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=1;
Bigelowiella natans|Rep: Small subunit ribosomal protein
S13 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 183
Score = 76.6 bits (180), Expect = 8e-13
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +3
Query: 330 SXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKT 509
S I++ GL P +PEDL+YLIKKA ++ HL + D +++ L L+ES I+RL+RYYK
Sbjct: 73 SKILRLKGLVPLVPEDLFYLIKKANKIKAHLSDFKHDLANRYHLNLIESHIYRLSRYYKR 132
Query: 510 KSVLPPNWKYESS 548
LP NWKY S+
Sbjct: 133 IFRLPKNWKYISN 145
Score = 38.3 bits (85), Expect = 0.27
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 155 SALPYRRSVPTWLKLTADDVKEQIYKLGKKG-LTPSQIGVMLRDSHGVAQVRFVTGKKI 328
+ +PYR+ W LT+ ++ + I L K L PS+IG++LRD V R ++G I
Sbjct: 14 TTVPYRKYSCEWKGLTSQNLIKIIANLAKNNNLPPSKIGLVLRDEKLVVDTRNISGMNI 72
>UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Archaeoglobus fulgidus
Length = 152
Score = 76.6 bits (180), Expect = 8e-13
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +3
Query: 321 KRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARY 500
K+ I+K G+ PEDL LIKKA+ +R HLE +RKDK ++ L L+E++I RL+ Y
Sbjct: 69 KKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEAKIWRLSSY 128
Query: 501 YKTKSVLPPNWKY 539
YK K VLP +WKY
Sbjct: 129 YKEKGVLPADWKY 141
Score = 56.4 bits (130), Expect = 9e-07
Identities = 23/54 (42%), Positives = 39/54 (72%)
Frame = +2
Query: 167 YRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 328
YR S P W+ ++ ++V++++ +L +G PS IG++LRD +G+ V+ VTGKKI
Sbjct: 18 YRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGIPSVKQVTGKKI 71
>UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13
protein; n=2; Pan troglodytes|Rep: PREDICTED: similar to
Rps13 protein - Pan troglodytes
Length = 269
Score = 74.9 bits (176), Expect = 3e-12
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +2
Query: 155 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRD 283
SAL Y SVPTWLKLT+D+VKEQIYKL KKGLTP QIGV+LRD
Sbjct: 227 SALLYHHSVPTWLKLTSDNVKEQIYKLTKKGLTPPQIGVILRD 269
>UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S13
- Encephalitozoon cuniculi
Length = 148
Score = 74.1 bits (174), Expect = 4e-12
Identities = 33/74 (44%), Positives = 48/74 (64%)
Frame = +3
Query: 315 LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLA 494
L + + ++ G+ P +P DL L+ +A +R HL RKD +K+RLILV SR++R+A
Sbjct: 67 LGESITRFLQRNGVVPKIPHDLESLVHRANTLRSHLNIYRKDNSAKYRLILVSSRMYRVA 126
Query: 495 RYYKTKSVLPPNWK 536
RYYK K +P NWK
Sbjct: 127 RYYKRKMRIPGNWK 140
Score = 55.6 bits (128), Expect = 2e-06
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +2
Query: 155 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 334
S PY + PTWL + D++K + ++G KG+ IG LRD +G+ + V G+ I R
Sbjct: 14 SVKPYATAFPTWLTKSVDEIKSDVIQMGNKGVPAPDIGTRLRDEYGIGKASDVLGESITR 73
Query: 335 Y 337
+
Sbjct: 74 F 74
>UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein S15P/S13E -
Cenarchaeum symbiosum
Length = 148
Score = 71.3 bits (167), Expect = 3e-11
Identities = 31/75 (41%), Positives = 50/75 (66%)
Frame = +3
Query: 321 KRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARY 500
K + IM+ G P+LPEDL +++KAV +++HL N+ D+ + L L+E+++HRL Y
Sbjct: 68 KSVTQIMEEHGATPELPEDLNNIVQKAVGLQRHLRANKGDRRNVRSLELIEAKVHRLDVY 127
Query: 501 YKTKSVLPPNWKYES 545
YK +P +WKY+S
Sbjct: 128 YKRIGRIPKDWKYKS 142
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 155 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 334
S P P+W++ +V++ I K K+GL PSQIG LRD H + R +TGK + +
Sbjct: 14 SIRPSSPKAPSWIQ-GPGEVEDLIVKYAKEGLAPSQIGSKLRDQHAIPLTRPITGKSVTQ 72
Query: 335 YHE 343
E
Sbjct: 73 IME 75
>UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Ribosomal
S13S15-like protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 149
Score = 67.7 bits (158), Expect = 4e-10
Identities = 29/75 (38%), Positives = 49/75 (65%)
Frame = +3
Query: 321 KRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARY 500
K I++ L ++PEDL ++KKAV +++HL+ N+ D+ + L L+E+++HRL+ Y
Sbjct: 69 KTIGEILEENDLKAEMPEDLENIVKKAVGLQRHLKENKGDRRNVRSLELIEAKVHRLSVY 128
Query: 501 YKTKSVLPPNWKYES 545
YK +P WKY+S
Sbjct: 129 YKKIGRIPATWKYKS 143
Score = 51.6 bits (118), Expect = 3e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +2
Query: 155 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 328
S P P+W+ + +++E + K K GLTPSQIG+ LRD H + ++ +T K I
Sbjct: 14 SIRPATLRAPSWITQSPAEIEELVIKYSKDGLTPSQIGIKLRDQHSIPLIKPITKKTI 71
>UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S15P/S13e -
Picrophilus torridus
Length = 146
Score = 58.0 bits (134), Expect = 3e-07
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +3
Query: 336 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 515
++K L D+PEDL LI++ KHL N+ D ++K + L+ S++ RL RYYK S
Sbjct: 74 VLKENNLESDVPEDLQALIERYKRAMKHLSLNKHDMNNKRKAQLIMSKMLRLIRYYKRTS 133
Query: 516 VLPPNWKYE 542
LP +W E
Sbjct: 134 RLPQDWSLE 142
Score = 48.4 bits (110), Expect = 3e-04
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +2
Query: 173 RSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 328
R P+W++ + D++KE I K+ K+G+T S IG+ LRD + + R V K+
Sbjct: 20 RERPSWIQYSDDEIKEMIVKMRKQGMTKSMIGIRLRDQYAIPGTRPVLHMKL 71
>UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultured
marine group II euryarchaeote 37F11|Rep: 30S ribosomal
protein S15 - uncultured marine group II euryarchaeote
37F11
Length = 151
Score = 57.6 bits (133), Expect = 4e-07
Identities = 28/76 (36%), Positives = 44/76 (57%)
Frame = +3
Query: 315 LAKRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLA 494
L KR ++ + PEDL L+++AVA+ +HL N +D +K L L E++I RL
Sbjct: 67 LGKRIGAVLSENDESGTYPEDLMNLMRQAVAIIEHLTTNSRDLHNKRSLELTEAKIRRLG 126
Query: 495 RYYKTKSVLPPNWKYE 542
YYK + L +W+Y+
Sbjct: 127 NYYKAEGRLDSDWRYK 142
Score = 50.0 bits (114), Expect = 8e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 155 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 328
S+ P+ P W A +++ I + K G++ +QIG +LRD H V VR V GK+I
Sbjct: 14 SSKPFMTEAPEWSNKDAKEIESLILQYFKDGMSTAQIGTILRDKHAVPNVRLVLGKRI 71
>UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S15P/S13e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 156
Score = 50.4 bits (115), Expect = 6e-05
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = +3
Query: 321 KRSSXIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARY 500
K+ + I++ PDLPEDL L+++AV +R H++ N D +K L +S+I RL Y
Sbjct: 73 KKVTEILEENEAEPDLPEDLRNLLERAVRLRDHMDENPGDYQNKRALQNTQSKIRRLIDY 132
Query: 501 YKTKSV 518
Y+ V
Sbjct: 133 YRGDEV 138
Score = 38.3 bits (85), Expect = 0.27
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +2
Query: 140 RVSPXSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDS--HG--VAQVR 307
R S S P P W + D ++ ++ +L ++G +PS+IG+ LRD G + V
Sbjct: 9 RGSSDSDKPAADEPPEWSDVDEDAIEARVVELAEQGHSPSEIGLKLRDEGVQGTPIPDVS 68
Query: 308 FVTGKKI 328
TGKK+
Sbjct: 69 LATGKKV 75
>UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 -
Rattus norvegicus (Rat)
Length = 481
Score = 38.3 bits (85), Expect = 0.27
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 155 SALPYRRSVPTWLKLTADDVK 217
SALPYRRSV WLKL +DDVK
Sbjct: 457 SALPYRRSVLMWLKLMSDDVK 477
>UniRef50_Q8FV54 Cluster: Ribose ABC transporter, periplasmic
D-ribose-binding protein; n=4; Rhizobiales|Rep: Ribose
ABC transporter, periplasmic D-ribose-binding protein -
Brucella suis
Length = 355
Score = 35.5 bits (78), Expect = 1.9
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +2
Query: 176 SVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVR 307
+VPTW+K T D + +++ +L K+GL +M+ D+ G AQ +
Sbjct: 57 AVPTWMKQTEDTIVDEVAQLKKEGLVKD---LMITDAQGNAQTQ 97
>UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7;
Eurotiomycetidae|Rep: Ribosomal protein S15, putative -
Aspergillus clavatus
Length = 306
Score = 35.1 bits (77), Expect = 2.5
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 387 LIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKY 539
L K + + +HL+ KDK +K L L+ + +L RY + K P W++
Sbjct: 238 LTAKIINLSRHLQSTNKDKHNKRNLRLLVHKRQKLLRYLRKKERGGPRWQH 288
>UniRef50_A5DK33 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1160
Score = 34.3 bits (75), Expect = 4.4
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 113 HGSYARSWXRVSPXSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLR-DSH 289
HG Y+ V P LP RS+PTW A ++ + + G+ + S I L SH
Sbjct: 178 HGEYSFYENHVRPLYLLPAYRSLPTWADTLATTIQFTLSRKGEIQVNISSISRFLTGSSH 237
Query: 290 GVAQVRFV 313
+ Q R +
Sbjct: 238 SLKQKRLL 245
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,562,793
Number of Sequences: 1657284
Number of extensions: 9683082
Number of successful extensions: 21096
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 20582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21093
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -