Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_H21
         (909 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0120 - 957365-957552,957642-957780,957847-957970,958398-95...   122   3e-28
08_01_0119 - 951492-951679,951780-951918,952023-952095,952196-95...   122   3e-28
07_03_0978 + 23099690-23100108,23100530-23100564,23100868-231009...   109   4e-24
02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416    107   1e-23

>08_01_0120 -
           957365-957552,957642-957780,957847-957970,958398-958486
          Length = 179

 Score =  122 bits (295), Expect = 3e-28
 Identities = 56/67 (83%), Positives = 61/67 (91%)
 Frame = +3

Query: 336 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 515
           I+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK   
Sbjct: 113 ILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTK 172

Query: 516 VLPPNWK 536
            LPP WK
Sbjct: 173 KLPPTWK 179



 Score = 65.7 bits (153), Expect = 5e-11
 Identities = 38/77 (49%), Positives = 45/77 (58%), Gaps = 17/77 (22%)
 Frame = +2

Query: 155 SALPYRRSVPTWLKLTADDV-----------------KEQIYKLGKKGLTPSQIGVMLRD 283
           SALPY+R+ P+WLK  A DV                 +E I K  KKG  PSQIGV+LRD
Sbjct: 36  SALPYKRTPPSWLKTAASDVGAFSFLSLSRLALFHLVEEMIMKAAKKGQMPSQIGVVLRD 95

Query: 284 SHGVAQVRFVTGKKILR 334
            HG+  V+ VTG KILR
Sbjct: 96  QHGIPLVKSVTGSKILR 112


>08_01_0119 -
           951492-951679,951780-951918,952023-952095,952196-952218
          Length = 140

 Score =  122 bits (295), Expect = 3e-28
 Identities = 56/67 (83%), Positives = 61/67 (91%)
 Frame = +3

Query: 336 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 515
           I+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK   
Sbjct: 74  ILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTK 133

Query: 516 VLPPNWK 536
            LPP WK
Sbjct: 134 KLPPTWK 140



 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 36/60 (60%), Positives = 45/60 (75%)
 Frame = +2

Query: 155 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 334
           SA+PY+R+ P+W+K  A DV+E I K  KKG  PSQIGV+LRD HG+  V+ VTG KILR
Sbjct: 14  SAIPYKRTPPSWVKTAAADVEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILR 73


>07_03_0978 +
           23099690-23100108,23100530-23100564,23100868-23100926,
           23101269-23101310,23102003-23102065,23102172-23102253,
           23102570-23102609,23102657-23102753
          Length = 278

 Score =  109 bits (261), Expect = 4e-24
 Identities = 48/67 (71%), Positives = 59/67 (88%)
 Frame = +3

Query: 336 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 515
           ++K+ GLAP++PEDLY+LIKKAVAMRKHLERNRKDKD+KFRLILVESR+HRL RYY+   
Sbjct: 74  VLKSRGLAPEVPEDLYFLIKKAVAMRKHLERNRKDKDTKFRLILVESRVHRLTRYYRLAK 133

Query: 516 VLPPNWK 536
            +P  +K
Sbjct: 134 KIPAFFK 140



 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = +2

Query: 155 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 334
           S LPYRR+ P W+K +A +V+E I ++ KKG  PSQIG +LRD+H V   + VTG KILR
Sbjct: 14  SVLPYRRAAPAWVKTSASEVEEMIVRVAKKGQLPSQIGAILRDAHAVPLAQGVTGGKILR 73


>02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416
          Length = 218

 Score =  107 bits (257), Expect = 1e-23
 Identities = 51/64 (79%), Positives = 55/64 (85%)
 Frame = +3

Query: 336 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 515
           I+KA GLAP + EDLY+LIKKAVA+RKHLERNRKDKDS FRLILVESRIHRL RYYK   
Sbjct: 131 ILKAHGLAPKILEDLYFLIKKAVAIRKHLERNRKDKDSSFRLILVESRIHRLVRYYKRTK 190

Query: 516 VLPP 527
            LPP
Sbjct: 191 KLPP 194



 Score = 40.7 bits (91), Expect = 0.002
 Identities = 19/41 (46%), Positives = 25/41 (60%)
 Frame = +2

Query: 209 DVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKIL 331
           +V+E I K  K G   SQIGV+LR  HG+  V+ +   KIL
Sbjct: 89  EVEEMIMKAAKMGQMSSQIGVVLRHQHGIPLVKSIASSKIL 129


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,194,206
Number of Sequences: 37544
Number of extensions: 280073
Number of successful extensions: 627
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)