Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_H17
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0442 + 20837492-20837621,20841842-20842075,20842435-208425...    30   2.9  
06_01_1118 - 9213785-9215051,9215811-9215992,9216075-9216611,921...    29   3.9  
07_03_0551 + 19374405-19374541,19375201-19375435,19375539-193757...    29   5.1  
03_01_0167 + 1374578-1375243,1375895-1376277,1377947-1378007,137...    29   5.1  
02_05_1090 - 34027737-34028582                                         29   6.8  

>06_03_0442 +
           20837492-20837621,20841842-20842075,20842435-20842528,
           20842653-20842870,20842956-20843095,20843231-20843878
          Length = 487

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = -2

Query: 512 TSRIIFIMMSRILILYFP-----VPSMGSISSWPPNVYSPTSVTEHFRSRRVLSY 363
           T R  F+++S +L +  P     +  +G++  WP  VY P  V  + R RR+  Y
Sbjct: 392 TWRTAFVVVSTVLAIVMPFFNDILGFLGAVGFWPLTVYYP--VEMYIRQRRIQRY 444


>06_01_1118 -
           9213785-9215051,9215811-9215992,9216075-9216611,
           9216742-9217224
          Length = 822

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -2

Query: 569 LCFQSLTCQYLSPSTILSSTSRIIFIMMSRILILYFPVPSMGS 441
           LC   +  QY +P  ++ + S ++F+++  +   YFP P+  S
Sbjct: 7   LCNFRVKKQYYNPRCLIPAVSLLLFVVILTVSNTYFPFPTTKS 49


>07_03_0551 +
           19374405-19374541,19375201-19375435,19375539-19375700,
           19375778-19375819,19375941-19376012,19376291-19376370,
           19376962-19377059,19377691-19377738,19377983-19378083,
           19378331-19378426,19378599-19378689,19379510-19379706,
           19380918-19381004,19381208-19381488,19381653-19381743
          Length = 605

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 570 RRGRLQSRIPVPEFV*RQP*FGEDNPHSTHAIR 668
           RRG++  ++PVPE + R    G + P    ++R
Sbjct: 62  RRGKISPQLPVPEHIPRPSYVGSNRPQELSSVR 94


>03_01_0167 +
           1374578-1375243,1375895-1376277,1377947-1378007,
           1378721-1379386
          Length = 591

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -1

Query: 294 QASLDGVHPAHGHRIHG--FNTEI-GD--SRCEKRYRLLR*GLQTSR 169
           Q + D +HP HGH + G  F   + GD  S  ++RYR L  G    R
Sbjct: 541 QMAPDAMHPGHGHHVVGGQFGVAMDGDAASHAQERYRSLSAGFHLLR 587


>02_05_1090 - 34027737-34028582
          Length = 281

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 197 FCAEDFRQAVSFGRHGVINFAKS 129
           FC+ED+   V F + G++N  +S
Sbjct: 136 FCSEDYPSEVGFSQEGIVNLVQS 158


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,723,295
Number of Sequences: 37544
Number of extensions: 334682
Number of successful extensions: 923
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)