Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_H14
         (905 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   1.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   4.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   4.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   4.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.7  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 527 KCTYWRNSLSSNRRHWYHVHKI 592
           +  YWR  +  N  HW H H +
Sbjct: 193 RVAYWREDIGLNLHHW-HWHLV 213


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = -1

Query: 203 SCIFIHDILIFKVQICDC-LFSGLQQERISHYFYVNNWGFN*IHKVIISKN*AQNLKE 33
           +C+  H + I    I +  L   +QQ  +SH F+++ + FN I    I ++  QN+K+
Sbjct: 565 NCMCTHKVDIPLNAIVEIVLVDEVQQPNLSHPFHLHGYAFNVIG---IGRSPDQNVKK 619


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
 Frame = -3

Query: 843 FVHTSSYQPDTDRLYSILTDLILV*VNLFVTNFLYF----KNTTLSKATQSISKT 691
           F+H  S Q DTD L  I T       NLF   F ++         S+  QS +KT
Sbjct: 300 FIHIRSRQEDTDTLVVIYT------FNLFYLCFCFYWLLVMVAMFSRTQQSANKT 348


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
 Frame = -3

Query: 843 FVHTSSYQPDTDRLYSILTDLILV*VNLFVTNFLYF----KNTTLSKATQSISKT 691
           F+H  S Q DTD L  I T       NLF   F ++         S+  QS +KT
Sbjct: 256 FIHIRSRQEDTDTLVVIYT------FNLFYLCFCFYWLLVMVAMFSRTQQSANKT 304


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 436 LMYTSEQSMVENIPPQTAKLPPTI 365
           + Y  E S  E+IPP    +PP +
Sbjct: 183 MYYRDECSFAESIPPYLFFVPPPL 206


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 436 LMYTSEQSMVENIPPQTAKLPPTI 365
           + Y  E S  E+IPP    +PP +
Sbjct: 416 MYYRDECSFAESIPPYLFFVPPPL 439


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 436 LMYTSEQSMVENIPPQTAKLPPTI 365
           + Y  E S  E+IPP    +PP +
Sbjct: 416 MYYRDECSFAESIPPYLFFVPPPL 439


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 6/27 (22%)
 Frame = -1

Query: 548 NSSNKCTSCHCR------YTISCSQDT 486
           +S N CT+C C       +T+ C Q T
Sbjct: 688 SSDNPCTTCFCENGNNKCFTMECPQVT 714


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -1

Query: 203 SCIFIHDILIFKVQICDC-LFSGLQQERISHYFYVNNWGFN*IHKVIISKN*AQNLKE 33
           +C+  H + I    I +  L   +Q   +SH F+++ + FN    V I ++  QN+K+
Sbjct: 565 NCMCTHQVDIPLNAIVEVVLVDEVQSPNLSHPFHLHGYAFN---VVGIGRSPDQNVKK 619


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,817
Number of Sequences: 336
Number of extensions: 5026
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25237652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)