Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_H10
(954 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.53
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 0.69
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 0.69
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 32 0.70
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 27 1.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 27 1.1
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 27 1.5
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 31 1.6
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 31 1.6
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 27 2.0
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 27 2.0
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 27 2.0
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 30 2.1
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 30 2.1
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 30 2.8
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 30 2.8
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 30 2.8
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 30 2.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.8
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 25 3.5
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 3.7
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 3.7
M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein. 24 4.1
AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical ... 24 4.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 24 4.1
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 4.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 5.4
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 29 6.5
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 29 6.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 6.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 6.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 6.5
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 8.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.6
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 8.6
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 8.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 8.6
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 28 8.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.6
AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical ... 28 8.6
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z81515-4|CAB04196.1| 739|Caenorhabditis elegans Hypothetical pr... 25 9.2
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 856 PPPPPPPPXXGXKKKKXXXXXGGGGGGGG 942
PPPPPPPP GGGGG
Sbjct: 305 PPPPPPPPAPAPVSSGGGYSEQSSGGGGG 333
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 941 PPPPPPPPXXXXXFFFFXPXXGGGGGG 861
PPPPPP P + GGGGG
Sbjct: 307 PPPPPPAPAPVSSGGGYSEQSSGGGGG 333
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 856 PPPPPPPPXXGXKKKKXXXXXGGGGGGGG 942
PPPPPPPP GGGGG
Sbjct: 305 PPPPPPPPAPAPVSSGGGYSEQSSGGGGG 333
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 941 PPPPPPPPXXXXXFFFFXPXXGGGGGG 861
PPPPPP P + GGGGG
Sbjct: 307 PPPPPPAPAPVSSGGGYSEQSSGGGGG 333
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 862 PPPPPPXXGXKKKKXXXXXGGGGGGGG 942
PPPPPP G GGGGGG G
Sbjct: 54 PPPPPPACGGGCGGGGGGCGGGGGGCG 80
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 862 PPPPPPXXGXKKKKXXXXXGGGGGGGG 942
PPPPPP G GGG GGGG
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGGGG 137
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 859 PPPPPPPXXGXKKKKXXXXXGGGGGGGG 942
PPPPPP G GGGGG GG
Sbjct: 54 PPPPPPACGGGCGGGGGGCGGGGGGCGG 81
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 859 PPPPPPPXXGXKKKKXXXXXGGGGGGGG 942
PPPPPP G GG GGGGG
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGGGGG 138
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 856 PPPPPPPPXXGXKKKKXXXXXGGGGGGGG 942
PPPPPP G GGGG GGG
Sbjct: 54 PPPPPPACGGGCGGGGGGCGGGGGGCGGG 82
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 856 PPPPPPPPXXGXKKKKXXXXXGGGGGGGG 942
PPPPPP G G GGGGGG
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGGGGGG 139
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect(2) = 0.69
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3
Query: 946 FXPPPPPPPP 917
F PPPPPPPP
Sbjct: 672 FMPPPPPPPP 681
Score = 28.3 bits (60), Expect = 8.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 856 PPPPPPPPXXG 888
PPPPPPPP G
Sbjct: 674 PPPPPPPPMPG 684
Score = 21.8 bits (44), Expect(2) = 0.69
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -3
Query: 940 PPPPPPPPXXXXXFFFSPP 884
PPPPP P +PP
Sbjct: 677 PPPPPMPGDLSSLLAAAPP 695
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect(2) = 0.69
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -3
Query: 946 FXPPPPPPPP 917
F PPPPPPPP
Sbjct: 672 FMPPPPPPPP 681
Score = 28.3 bits (60), Expect = 8.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 856 PPPPPPPPXXG 888
PPPPPPPP G
Sbjct: 674 PPPPPPPPMPG 684
Score = 21.8 bits (44), Expect(2) = 0.69
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -3
Query: 940 PPPPPPPPXXXXXFFFSPP 884
PPPPP P +PP
Sbjct: 677 PPPPPMPGDLSSLLAAAPP 695
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 856 PPPPPPPPXXGXKKKK 903
PPPPPPPP G +KK
Sbjct: 66 PPPPPPPPQCGCGRKK 81
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 26.6 bits (56), Expect(2) = 1.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 939 PPPPPPPP 916
PPPPPPPP
Sbjct: 1356 PPPPPPPP 1363
Score = 23.0 bits (47), Expect(2) = 1.1
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = -1
Query: 936 PPPPPPPXXXXFFFFXPP 883
P PPPPP PP
Sbjct: 1375 PVPPPPPLFSPSMILPPP 1392
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.1 bits (57), Expect(2) = 1.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 936 PPPPPPPXXXXFFF 895
PPPPPPP F F
Sbjct: 576 PPPPPPPPPPSFMF 589
Score = 22.6 bits (46), Expect(2) = 1.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 939 PPPPPPPP 916
PPPPPP P
Sbjct: 551 PPPPPPLP 558
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 26.6 bits (56), Expect(2) = 1.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 939 PPPPPPPP 916
PPPPPPPP
Sbjct: 362 PPPPPPPP 369
Score = 22.6 bits (46), Expect(2) = 1.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 948 FXXPPPPPP 922
F PPPPPP
Sbjct: 321 FILPPPPPP 329
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 939 PPPPPPPPXXXXFFFFXPP 883
PPPPPPPP F PP
Sbjct: 1012 PPPPPPPPPADFFANIAPP 1030
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 940 PPPPPPPPXXXXXFFFSPP 884
PPPPPPPP +PP
Sbjct: 1012 PPPPPPPPPADFFANIAPP 1030
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 939 PPPPPPPPXXXXFFFFXPP 883
PPPPPPPP F PP
Sbjct: 251 PPPPPPPPPADFFANIAPP 269
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 940 PPPPPPPPXXXXXFFFSPP 884
PPPPPPPP +PP
Sbjct: 251 PPPPPPPPPADFFANIAPP 269
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 27.5 bits (58), Expect(2) = 2.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 847 LXXPPPPPPPP 879
L PPPPPPPP
Sbjct: 185 LQAPPPPPPPP 195
Score = 21.4 bits (43), Expect(2) = 2.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 856 PPPPPPPPXXG 888
PPPPPP G
Sbjct: 190 PPPPPPQNPRG 200
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 27.5 bits (58), Expect(2) = 2.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 847 LXXPPPPPPPP 879
L PPPPPPPP
Sbjct: 185 LQAPPPPPPPP 195
Score = 21.4 bits (43), Expect(2) = 2.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 856 PPPPPPPPXXG 888
PPPPPP G
Sbjct: 190 PPPPPPQNPRG 200
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 27.5 bits (58), Expect(2) = 2.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 847 LXXPPPPPPPP 879
L PPPPPPPP
Sbjct: 185 LQAPPPPPPPP 195
Score = 21.4 bits (43), Expect(2) = 2.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 856 PPPPPPPPXXG 888
PPPPPP G
Sbjct: 190 PPPPPPQNPRG 200
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 941 PPPPPPPPXXXXXFFFFXPXXGGGGGGGG 855
PPPPPPPP + GG G GG
Sbjct: 63 PPPPPPPPAPIGGGAGYAAPFGGPGPVGG 91
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 856 PPPPPPPPXXGXKKKKXXXXXGGGGGGGG 942
PPPPPPPP GG G GG
Sbjct: 63 PPPPPPPPAPIGGGAGYAAPFGGPGPVGG 91
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 941 PPPPPPPPXXXXXFFFFXPXXGGGGGGGG 855
PPPPPPPP + GG G GG
Sbjct: 63 PPPPPPPPAPIGGGAGYAAPFGGPGPVGG 91
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 856 PPPPPPPPXXGXKKKKXXXXXGGGGGGGG 942
PPPPPPPP GG G GG
Sbjct: 63 PPPPPPPPAPIGGGAGYAAPFGGPGPVGG 91
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 940 PPPPPPPPXXXXXFFFSPP 884
PPPPPPPP F PP
Sbjct: 476 PPPPPPPPPENEPEEFPPP 494
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 940 PPPPPPPPXXXXXFFFSPP 884
PPPPPPPP F PP
Sbjct: 477 PPPPPPPPENEPEEFPPPP 495
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 939 PPPPPPPPXXXXFFFFXPP 883
PPPPPPPP F PP
Sbjct: 476 PPPPPPPPPENEPEEFPPP 494
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 939 PPPPPPPPXXXXFFFFXPP 883
PPPPPPPP F PP
Sbjct: 477 PPPPPPPPENEPEEFPPPP 495
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 856 PPPPPPPPXXGXKKKKXXXXXGGGGG 933
PPPPPPPP G G GG
Sbjct: 65 PPPPPPPPAFGGLGGGAAYPGAGAGG 90
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 856 PPPPPPPPXXGXKKKKXXXXXGGGGG 933
PPPPPPPP G G GG
Sbjct: 65 PPPPPPPPAFGGLGGGAAYPGAGAGG 90
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 856 PPPPPPPPXXGXKKKKXXXXXGGGGG 933
PPPPPPPP G G GG
Sbjct: 65 PPPPPPPPAFGGLGGGAAYPGAGAGG 90
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 856 PPPPPPPPXXGXK 894
PPPPPPPP G K
Sbjct: 769 PPPPPPPPPGGFK 781
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 859 PPPPPPPXXGXKKKKXXXXXGGGGGG 936
PPPPPPP G GG GG
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGG 783
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 856 PPPPPPPPXXGXK 894
PPPPPPPP G K
Sbjct: 769 PPPPPPPPPGGFK 781
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 859 PPPPPPPXXGXKKKKXXXXXGGGGGG 936
PPPPPPP G GG GG
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGG 783
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 856 PPPPPPPPXXGXK 894
PPPPPPPP G K
Sbjct: 352 PPPPPPPPPGGFK 364
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 859 PPPPPPPXXGXKKKKXXXXXGGGGGG 936
PPPPPPP G GG GG
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGG 366
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 25.4 bits (53), Expect(2) = 3.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 859 PPPPPPPXXG 888
PPPPPPP G
Sbjct: 154 PPPPPPPLMG 163
Score = 22.6 bits (46), Expect(2) = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 856 PPPPPPPP 879
P PPPPPP
Sbjct: 152 PLPPPPPP 159
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 856 PPPPPPPPXXGXKKKKXXXXXGGGGGG 936
P PPPPP G + GGGGG
Sbjct: 1320 PLPPPPPMIRGPPPDQMYRDRSGGGGG 1346
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 856 PPPPPPPPXXGXKKKKXXXXXGGGGGG 936
P PPPPP G + GGGGG
Sbjct: 1320 PLPPPPPMIRGPPPDQMYRDRSGGGGG 1346
>M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein.
Length = 1110
Score = 24.2 bits (50), Expect(2) = 4.1
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 948 FXXPPPPPPP 919
+ PPPPPPP
Sbjct: 1075 YALPPPPPPP 1084
Score = 23.4 bits (48), Expect(2) = 4.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 939 PPPPPPPP 916
PPPPPP P
Sbjct: 1079 PPPPPPAP 1086
>AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical
protein Y47D3A.6a protein.
Length = 1109
Score = 24.2 bits (50), Expect(2) = 4.1
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 948 FXXPPPPPPP 919
+ PPPPPPP
Sbjct: 1074 YALPPPPPPP 1083
Score = 23.4 bits (48), Expect(2) = 4.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 939 PPPPPPPP 916
PPPPPP P
Sbjct: 1078 PPPPPPAP 1085
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 23.8 bits (49), Expect(2) = 4.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 856 PPPPPPP 876
PPPPPPP
Sbjct: 122 PPPPPPP 128
Score = 23.8 bits (49), Expect(2) = 4.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 859 PPPPPPP 879
PPPPPPP
Sbjct: 138 PPPPPPP 144
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 648 PPPXKKXVGXGWXXPPPPP 704
PPP G G+ PPPPP
Sbjct: 40 PPPPPPPCGGGYEAPPPPP 58
Score = 28.3 bits (60), Expect = 8.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 856 PPPPPPPPXXG 888
PPPPPPPP G
Sbjct: 39 PPPPPPPPCGG 49
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 940 PPPPPPPPXXXXXFFFSPP 884
PPPPPPPP +PP
Sbjct: 67 PPPPPPPPPLISILQQAPP 85
Score = 24.2 bits (50), Expect(2) = 5.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 847 LXXPPPPPPPP 879
L PPPPPPP
Sbjct: 80 LQQAPPPPPPP 90
Score = 23.0 bits (47), Expect(2) = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
Frame = +1
Query: 856 PPP----PPPPPXXGXK 894
PPP PPPPP G K
Sbjct: 91 PPPTLKAPPPPPILGLK 107
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 941 PPPPPPPPXXXXXFFFFXPXXGGGGGGGG 855
PPPPPPPP F G G G
Sbjct: 247 PPPPPPPPAPSPFVDAFKSFGGNNQAGQG 275
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 941 PPPPPPPPXXXXXFFFFXPXXGGGGGGGG 855
PPPPPPPP F G G G
Sbjct: 245 PPPPPPPPAPSPFVDAFKSFGGNNQAGQG 273
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 648 PPPXKKXVGXGWXXPPPPP 704
PPP VG G PPPPP
Sbjct: 235 PPPPLPPVGAGAPPPPPPP 253
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 648 PPPXKKXVGXGWXXPPPPP 704
PPP VG G PPPPP
Sbjct: 221 PPPPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 648 PPPXKKXVGXGWXXPPPPP 704
PPP VG G PPPPP
Sbjct: 221 PPPPLPPVGAGAPPPPPPP 239
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.3 bits (60), Expect = 8.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 856 PPPPPPPPXXG 888
PPPPPPPP G
Sbjct: 808 PPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.3 bits (60), Expect = 8.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 856 PPPPPPPPXXG 888
PPPPPPPP G
Sbjct: 808 PPPPPPPPPGG 818
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 856 PPPPPPPPXXG 888
PPPPPPPP G
Sbjct: 630 PPPPPPPPPMG 640
Score = 28.3 bits (60), Expect = 8.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 856 PPPPPPPPXXG 888
PPPPPPPP G
Sbjct: 649 PPPPPPPPPSG 659
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 856 PPPPPPPPXXG 888
PPPPPPPP G
Sbjct: 456 PPPPPPPPPMG 466
Score = 28.3 bits (60), Expect = 8.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 856 PPPPPPPPXXG 888
PPPPPPPP G
Sbjct: 475 PPPPPPPPPSG 485
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 940 PPPPPPPPXXXXXFFFSPP 884
PPPPPPPP +PP
Sbjct: 5 PPPPPPPPPPPPPAASAPP 23
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 940 PPPPPPPPXXXXXFFFSPP 884
PPPPPPPP +PP
Sbjct: 5 PPPPPPPPPPPPPAASAPP 23
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 940 PPPPPPPPXXXXXFFFSPP 884
PPPPPPPP PP
Sbjct: 515 PPPPPPPPPALEQEISGPP 533
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.3 bits (60), Expect = 8.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 856 PPPPPPPPXXG 888
PPPPPPPP G
Sbjct: 53 PPPPPPPPMCG 63
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 856 PPPPPPPPXXG 888
PPPPPPPP G
Sbjct: 577 PPPPPPPPMLG 587
>AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical
protein C30F8.3 protein.
Length = 328
Score = 28.3 bits (60), Expect = 8.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1
Query: 948 FXXPPPPPPPP 916
F PPPPPPPP
Sbjct: 70 FTQPPPPPPPP 80
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 24.6 bits (51), Expect(2) = 8.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 936 PPPPPPPXXXXF 901
PPPPPPP F
Sbjct: 792 PPPPPPPFLTCF 803
Score = 21.8 bits (44), Expect(2) = 8.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 948 FXXPPPPPPP 919
F P PPPPP
Sbjct: 781 FALPVPPPPP 790
>Z81515-4|CAB04196.1| 739|Caenorhabditis elegans Hypothetical
protein F26H11.4 protein.
Length = 739
Score = 24.6 bits (51), Expect(2) = 9.2
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 856 PPPPPPPPXXGXKK 897
P PPPPPP KK
Sbjct: 185 PCPPPPPPLSERKK 198
Score = 21.8 bits (44), Expect(2) = 9.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 847 LXXPPPPPP 873
L PPPPPP
Sbjct: 184 LPCPPPPPP 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,205,991
Number of Sequences: 27780
Number of extensions: 356586
Number of successful extensions: 11044
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4998
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -