Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_H08
(893 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.31
07_01_0479 + 3606663-3607448 33 0.40
11_06_0610 - 25449085-25453284 32 0.54
09_02_0603 - 11150739-11150746,11150791-11151340 32 0.54
03_01_0515 - 3864796-3865425 31 1.6
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.2
08_01_0059 - 394001-394708 30 2.2
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 30 2.2
12_02_1177 - 26708215-26708309,26708355-26708392,26708476-267095... 29 3.8
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.0
07_01_0080 + 587674-588510 29 5.0
06_03_1310 + 29238644-29240260 29 5.0
03_02_0738 - 10824121-10825572 29 5.0
09_04_0535 + 18397051-18397644 29 6.6
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 29 6.6
04_04_0183 - 23384290-23384783,23385064-23385139,23385291-23385296 28 8.7
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 8.7
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 8.7
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.1 bits (72), Expect = 0.31
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
PPP PPP PP GPPPP
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPP 356
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPPXXG 556
PP G PPP G PP PPPP G
Sbjct: 358 PPKGPSPPPPPPPGGKKGGPP---PPPPKGG 385
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
PPP PPP PP GP PP
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPPKGPSPP 365
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
PPP PPP G PP PPP
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPPP 366
>07_01_0479 + 3606663-3607448
Length = 261
Score = 32.7 bits (71), Expect = 0.40
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 452 GGCSPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
GG PPPG PP G P G PPP
Sbjct: 199 GGPPPPPGPFMRGPPPMGPPQVRPGMPGGPPP 230
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 467 PPGXXFXPPPXXGXXXXXPPXXGPPPPXXG 556
PP PPP G PP GPP G
Sbjct: 194 PPAFPGGPPPPPGPFMRGPPPMGPPQVRPG 223
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 32.3 bits (70), Expect = 0.54
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 461 SPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
SPPP PPP PP PPPP
Sbjct: 849 SPPPEKSSSPPPEAHVSSPPPPEKSPPPP 877
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
PPP PPP P PPPP
Sbjct: 1153 PPPAPVILPPPPIKSPPPPAPVISPPPP 1180
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
PPP PPP P PPPP
Sbjct: 1185 PPPAPVILPPPPVKSPPPPAPVISPPPP 1212
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
PPP PPP P PPPP
Sbjct: 1217 PPPAPVILPPPPVKSPPPPAPVISPPPP 1244
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 461 SPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
SPPP PPP PP PPPP
Sbjct: 1144 SPPPPEKSPPPPAP-VILPPPPIKSPPPP 1171
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 461 SPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
SPPP PPP PP PPPP
Sbjct: 1176 SPPPPVKSPPPPAP-VILPPPPVKSPPPP 1203
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 461 SPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
SPPP PPP PP PPPP
Sbjct: 1208 SPPPPVKSPPPPAP-VILPPPPVKSPPPP 1235
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 32.3 bits (70), Expect = 0.54
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +2
Query: 452 GGCSPPPGXXFXPPPXXGXXXXXPPXXG-PPPPXXGXXF 565
G + PP F PPP G P G PPPP G F
Sbjct: 33 GNFALPPPFGFPPPPPPGSTFVPLPQSGVPPPPPLGSFF 71
>03_01_0515 - 3864796-3865425
Length = 209
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
PPP PPP PP PPPP
Sbjct: 75 PPPSVTSSPPPPPLPPPPPPPAASPPPP 102
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 461 SPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
S PP PPP PP PPPP
Sbjct: 81 SSPPPPPLPPPPPPPAASPPPPPPSPPPP 109
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 461 SPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
+PPP PPP PP PPPP
Sbjct: 543 APPPPPPPPPPPSGNKPAFSPPPPPPPPP 571
>08_01_0059 - 394001-394708
Length = 235
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 461 SPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
+PPP PPP PP PPPP
Sbjct: 10 APPPPATPPPPPRRAPPPPSPPIRPPPPP 38
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPPXXG 556
PPP PPP PP PPPP G
Sbjct: 297 PPPVGGTQPPPPPPPLANGPPRSIPPPPMTG 327
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPPXXG 556
PPP PPP PP PPPP G
Sbjct: 273 PPPPPQAPPPPPPNAPMGMPPRI-PPPPVGG 302
>12_02_1177 -
26708215-26708309,26708355-26708392,26708476-26709563,
26709826-26709945,26710018-26710098,26710696-26710812,
26711122-26711904
Length = 773
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 547 GGGGXXXGGXXXXXXXXGGGXKXXPRGGG 461
GGGG GG GGG + RGGG
Sbjct: 12 GGGGGGGGGGGAGQSGDGGGSRGGRRGGG 40
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
Frame = +2
Query: 464 PPPGXXFXPPPXX---GXXXXXPPXXGPPPP 547
PPP + PPP G PP PPPP
Sbjct: 84 PPPQMYYQPPPPPPPYGVNSSQPPPPPPPPP 114
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
PPP PPP G PP PPPP
Sbjct: 91 PPPPPP--PPPSSGSPPPPPPPPPPPPP 116
>06_03_1310 + 29238644-29240260
Length = 538
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Frame = +2
Query: 452 GGCSPPPGXXFXPPPXXGXXXXXPPXXG-----PPPPXXGXXFXF 571
G S PP + PP G PP G PPPP G F
Sbjct: 475 GTPSSPPSSSWSPPQGGGGKLPFPPVHGVAYSSPPPPPSGDKLPF 519
>03_02_0738 - 10824121-10825572
Length = 483
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
PPP PP PP PPPP
Sbjct: 79 PPPSPPSSSPPPLSFPPPPPPPSSPPPP 106
>09_04_0535 + 18397051-18397644
Length = 197
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 488 PPPXXGXXXXXPPXXGPPPPXXG 556
PPP G PP PPPP G
Sbjct: 9 PPPVMGAPVGFPPGAYPPPPPAG 31
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 547 GGGGXXXGGXXXXXXXXGGGXKXXPRGGG 461
GGGG GG GGG RGGG
Sbjct: 552 GGGGYSGGGGGGGYSGGGGGYSGGGRGGG 580
>04_04_0183 - 23384290-23384783,23385064-23385139,23385291-23385296
Length = 191
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = -2
Query: 607 GXPPPPXFFXXKKXKXXXXXGGGGXXXGGXXXXXXXXGGGXKXXPRGGGTP 455
G PPP ++ GGGG GG G GGG P
Sbjct: 94 GAPPPAPYYGNGGYPPPHQRGGGGGGSGGGYYTPMTMATGGYYGGGGGGYP 144
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +2
Query: 455 GCSPPPGXXFXPPPXXGXXXXXPPXXGP-PPPXXG 556
G PPP PPP PP GP PPP G
Sbjct: 346 GSGPPP-----PPPPAAPAAPRPPGPGPGPPPPPG 375
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
PPP PPP PP PPPP
Sbjct: 354 PPPPPPPPPPPPKLNTAPKPPPPPPPPP 381
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,229,797
Number of Sequences: 37544
Number of extensions: 425143
Number of successful extensions: 1907
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1649
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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