Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_H08
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 34 0.16
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 34 0.16
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.16
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.16
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.16
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.36
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 31 0.84
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 1.9
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 30 1.9
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 30 1.9
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 30 1.9
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 29 3.4
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.5
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 7.8
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPPXXG 556
PPP F PPP PP PPPP G
Sbjct: 298 PPPRGHFPPPPPHFMGRGMPPPFMPPPPHFG 328
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPPXXG 556
PPP F PPP PP PPPP G
Sbjct: 298 PPPRGHFPPPPPHFMGRGMPPPFMPPPPHFG 328
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 455 GCSPPPGXXFXPPPXXGXXXXXPPXXGPPPPXXG 556
G PPP PPP G P PPPP G
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 455 GCSPPPGXXFXPPPXXGXXXXXPPXXGPPPPXXG 556
G PPP PPP PP PPPP G
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 286
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 455 GCSPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
G PPP PPP G P PPPP
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 452 GGCSPPPGXXFXPPPXXGXXXXXPPXXGPPP 544
G PPP PPP G PP G PP
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
Frame = +2
Query: 461 SPPPGXXFXPPPXXGXXXXXPPXXG---PPPPXXG 556
SPPP PPP PP G PPPP G
Sbjct: 271 SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 305
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +2
Query: 461 SPPPGXXFXPPPXXGXXXXXPPXXG-PPPPXXG 556
SPP PPP PP G PPPP G
Sbjct: 246 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG 278
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 452 GGCSPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
G PPP PPP G PP G PPP
Sbjct: 270 GSPPPPPTGSPPPPPAGG--SPPPPRAGSPPP 299
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 455 GCSPPPGXXFXPPPXXGXXXXXPPXXGPPPPXXG 556
G PPP PPP G P PPPP G
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 455 GCSPPPGXXFXPPPXXGXXXXXPPXXGPPPPXXG 556
G PPP PPP PP PPPP G
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 307
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 455 GCSPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
G PPP PPP G P PPPP
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 452 GGCSPPPGXXFXPPPXXGXXXXXPPXXGPPP 544
G PPP PPP G PP G PP
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
Frame = +2
Query: 461 SPPPGXXFXPPPXXGXXXXXPPXXG---PPPPXXG 556
SPPP PPP PP G PPPP G
Sbjct: 292 SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 326
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +2
Query: 461 SPPPGXXFXPPPXXGXXXXXPPXXG-PPPPXXG 556
SPP PPP PP G PPPP G
Sbjct: 267 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG 299
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 452 GGCSPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
G PPP PPP G PP G PPP
Sbjct: 291 GSPPPPPTGSPPPPPAGG--SPPPPRAGSPPP 320
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 455 GCSPPPGXXFXPPPXXGXXXXXPPXXGPPPPXXG 556
G PPP PPP G P PPPP G
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 455 GCSPPPGXXFXPPPXXGXXXXXPPXXGPPPPXXG 556
G PPP PPP PP PPPP G
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 292
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 455 GCSPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
G PPP PPP G P PPPP
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 452 GGCSPPPGXXFXPPPXXGXXXXXPPXXGPPP 544
G PPP PPP G PP G PP
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
Frame = +2
Query: 461 SPPPGXXFXPPPXXGXXXXXPPXXG---PPPPXXG 556
SPPP PPP PP G PPPP G
Sbjct: 277 SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 311
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +2
Query: 461 SPPPGXXFXPPPXXGXXXXXPPXXG-PPPPXXG 556
SPP PPP PP G PPPP G
Sbjct: 252 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG 284
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 452 GGCSPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
G PPP PPP G PP G PPP
Sbjct: 276 GSPPPPPTGSPPPPPAGG--SPPPPRAGSPPP 305
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Frame = +2
Query: 452 GGCSPPP----GXXFXPPPXXGXXXXXPPXXGPPPP 547
GG PPP G PPP G PP G PPP
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPP 116
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Frame = +2
Query: 452 GGCSPPPGXXFXPPP---XXGXXXXXPPXXG---PPPPXXG 556
G PPPG PPP G PP G PPPP G
Sbjct: 72 GFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFG 112
Score = 26.6 bits (56), Expect(2) = 3.0
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 7/39 (17%)
Frame = +2
Query: 452 GGCSPPP---GXXFXPPPXXGXXXXXPPXXG----PPPP 547
GG PPP G PPP G PP G P PP
Sbjct: 92 GGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
Score = 21.4 bits (43), Expect(2) = 3.0
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +2
Query: 311 PGGVXSXPXFWGGGXAP 361
PGG+ P + GG P
Sbjct: 80 PGGIPPPPPMFAGGIPP 96
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 31.5 bits (68), Expect = 0.84
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 452 GGCSPP-PGXXFXPPPXXGXXXXXPPXXGPPPPXXG 556
GGC+P P PPP G PP PPPP G
Sbjct: 30 GGCAPAAPACAPPPPPMCGCAPPPPP--PPPPPMCG 63
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 452 GGCSPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
GG PPP PP G PP G PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 452 GGCSPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
GG PPP PP G PP G PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 452 GGCSPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
GG PPP PP G PP G PPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +2
Query: 458 CSPPPGXXFXPPPXXG--XXXXXPPXXGPPPP 547
C PP PPP G PP GPPPP
Sbjct: 1582 CQGPPPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 608 GGPPPPXFFXXXKXKXXXPXRGGGXPXGG 522
GGPPPP P RGGG P G
Sbjct: 1466 GGPPPPRGMNSPMRGMPPPMRGGGPPMRG 1494
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +2
Query: 458 CSPPPGXX--FXPPPXXGXXXXXPPXXGPPPP 547
C PPP F PPP PP PPPP
Sbjct: 54 CPPPPPCPAQFCPPPPICPPPPPPPMPCPPPP 85
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPPXXG 556
P P PPP G PP G PPP G
Sbjct: 75 PMPHHMGMPPPGMGPPPFMPPPIGMPPPPLG 105
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPPXXG 556
P P PPP G PP G PPP G
Sbjct: 98 PMPHHMGMPPPGMGPPPFMPPPIGMPPPPLG 128
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 464 PPPGXXFXPPPXXGXXXXXPPXXGPPPPXXG 556
P P PPP G PP G PPP G
Sbjct: 348 PMPHHMGMPPPGMGPPPFMPPPIGMPPPPLG 378
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 455 GCSPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
GC+ PP PPP P PPPP
Sbjct: 30 GCNQPPIVIAGPPPCFDCPPPAPIFVAPPPP 60
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = -2
Query: 601 PPPPXFFXXKKXKXXXXXGGGGXXXGGXXXXXXXXGGGXKXXPRGGG 461
P PP + + GGGG GG GGG GGG
Sbjct: 68 PAPPAAYCPQVQPVYVQSGGGGCGGGGCGGGGGGCGGGGGCGGGGGG 114
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 452 GGCSPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
GG PPP P G P GPPPP
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPP 438
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +2
Query: 452 GGCSPPPGXX--FXPPPXXGXXXXXPPXXGPPP 544
G PP G F PPP G PP G PP
Sbjct: 421 GSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPP 453
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = +2
Query: 458 CSPPPGXXFXPPPXX-GXXXXXPPXXGPPPP 547
C PPP PPP PP PPPP
Sbjct: 30 CPPPPPPMCAPPPLPCPPPPICPPQFCPPPP 60
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 458 CSPPPGXXFXPPPXXGXXXXXPPXXGPPPP 547
C+PPP PP PP PPPP
Sbjct: 38 CAPPPLPCPPPPICPPQFCPPPPMCPPPPP 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,054,260
Number of Sequences: 27780
Number of extensions: 242732
Number of successful extensions: 1030
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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