Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_H05
(918 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 193 7e-49
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 193 7e-49
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 193 7e-49
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 193 7e-49
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 193 7e-49
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 193 7e-49
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 193 7e-49
BC001954-1|AAH01954.1| 683|Homo sapiens PRP3 pre-mRNA processin... 40 0.010
BC000184-1|AAH00184.1| 683|Homo sapiens PRP3 pre-mRNA processin... 40 0.010
AL611942-1|CAH70312.1| 683|Homo sapiens PRP3 pre-mRNA processin... 40 0.010
AK222825-1|BAD96545.1| 683|Homo sapiens PRP3 pre-mRNA processin... 40 0.010
AF016370-1|AAC51926.1| 683|Homo sapiens U4/U6 small nuclear rib... 40 0.010
AF001947-1|AAC09069.1| 682|Homo sapiens U4/U6-associated RNA sp... 40 0.010
BC033094-1|AAH33094.1| 1332|Homo sapiens inhibitor of kappa ligh... 36 0.27
AL359692-2|CAI40569.1| 1332|Homo sapiens inhibitor of kappa ligh... 36 0.27
AL354797-1|CAI39465.1| 1332|Homo sapiens inhibitor of kappa ligh... 36 0.27
AF153419-1|AAG43369.1| 1332|Homo sapiens IkappaBkinase complex-a... 36 0.27
AB210033-1|BAE06115.1| 1342|Homo sapiens IKBKAP variant protein ... 36 0.27
AF044195-1|AAC64258.1| 1332|Homo sapiens IkappaB kinase complex ... 35 0.36
U69140-1|AAB40661.1| 249|Homo sapiens zyginII protein. 33 1.5
U60061-1|AAC51283.1| 153|Homo sapiens FEZ2 protein. 33 1.5
BX537785-1|CAD97842.1| 182|Homo sapiens hypothetical protein pr... 33 1.5
AF113124-1|AAF14865.1| 320|Homo sapiens FEZ2 protein protein. 33 1.5
AC007401-1|AAY14650.1| 353|Homo sapiens unknown protein. 33 1.5
AB076184-1|BAD06207.1| 353|Homo sapiens fasciculation and elong... 33 1.5
DQ072116-1|AAY57326.1| 147|Homo sapiens polymerase (DNA directe... 31 4.4
BC004170-1|AAH04170.1| 147|Homo sapiens polymerase (DNA directe... 31 4.4
BC003166-1|AAH03166.1| 147|Homo sapiens polymerase (DNA directe... 31 4.4
AY720898-1|AAU15052.1| 147|Homo sapiens arsenic transactivated ... 31 4.4
AL137066-5|CAH70100.1| 147|Homo sapiens polymerase (DNA directe... 31 4.4
AK074782-1|BAC11206.1| 147|Homo sapiens protein ( Homo sapiens ... 31 4.4
AK074629-1|BAC11099.1| 147|Homo sapiens protein ( Homo sapiens ... 31 4.4
AF261689-1|AAF90133.1| 147|Homo sapiens DNA polymerase epsilon ... 31 4.4
AF226077-1|AAF72417.1| 147|Homo sapiens CHRAC17 protein. 31 4.4
BC110386-1|AAI10387.1| 353|Homo sapiens fasciculation and elong... 31 5.9
BC146779-1|AAI46780.1| 1669|Homo sapiens intersectin 2 protein. 31 7.7
AK074762-1|BAC11190.1| 147|Homo sapiens protein ( Homo sapiens ... 31 7.7
AF248540-1|AAF63600.1| 1681|Homo sapiens intersectin 2 protein. 31 7.7
AF182199-1|AAF59904.1| 1248|Homo sapiens intersectin 2 short iso... 31 7.7
AF182198-1|AAF59903.1| 1696|Homo sapiens intersectin 2 long isof... 31 7.7
AC009228-1|AAX93122.1| 1329|Homo sapiens unknown protein. 31 7.7
AB033082-1|BAA86570.1| 1676|Homo sapiens KIAA1256 protein protein. 31 7.7
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 193 bits (471), Expect = 7e-49
Identities = 95/148 (64%), Positives = 116/148 (78%), Gaps = 8/148 (5%)
Frame = +1
Query: 223 YTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILNMEDD 402
+ GTS EQD RFS+K+KKL+KQ+KF +CL ++VDMSKV L+V+KPWIT+++TEIL EDD
Sbjct: 6 FRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDD 65
Query: 403 VVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQ 582
VVIE++ NQLE K P K MQINLTGFLNGKNAR FMGELW LLLSAQ + GIP +F +
Sbjct: 66 VVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLE 125
Query: 583 QKKEEIKKRMEEQ--------QNKDKDK 642
KKEEIK+R EQ Q++DKDK
Sbjct: 126 LKKEEIKQRQIEQEKLASMKKQDEDKDK 153
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 193 bits (471), Expect = 7e-49
Identities = 95/148 (64%), Positives = 116/148 (78%), Gaps = 8/148 (5%)
Frame = +1
Query: 223 YTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILNMEDD 402
+ GTS EQD RFS+K+KKL+KQ+KF +CL ++VDMSKV L+V+KPWIT+++TEIL EDD
Sbjct: 6 FRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDD 65
Query: 403 VVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQ 582
VVIE++ NQLE K P K MQINLTGFLNGKNAR FMGELW LLLSAQ + GIP +F +
Sbjct: 66 VVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLE 125
Query: 583 QKKEEIKKRMEEQ--------QNKDKDK 642
KKEEIK+R EQ Q++DKDK
Sbjct: 126 LKKEEIKQRQIEQEKLASMKKQDEDKDK 153
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 193 bits (471), Expect = 7e-49
Identities = 95/148 (64%), Positives = 116/148 (78%), Gaps = 8/148 (5%)
Frame = +1
Query: 223 YTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILNMEDD 402
+ GTS EQD RFS+K+KKL+KQ+KF +CL ++VDMSKV L+V+KPWIT+++TEIL EDD
Sbjct: 6 FRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDD 65
Query: 403 VVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQ 582
VVIE++ NQLE K P K MQINLTGFLNGKNAR FMGELW LLLSAQ + GIP +F +
Sbjct: 66 VVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLE 125
Query: 583 QKKEEIKKRMEEQ--------QNKDKDK 642
KKEEIK+R EQ Q++DKDK
Sbjct: 126 LKKEEIKQRQIEQEKLASMKKQDEDKDK 153
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 193 bits (471), Expect = 7e-49
Identities = 95/148 (64%), Positives = 116/148 (78%), Gaps = 8/148 (5%)
Frame = +1
Query: 223 YTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILNMEDD 402
+ GTS EQD RFS+K+KKL+KQ+KF +CL ++VDMSKV L+V+KPWIT+++TEIL EDD
Sbjct: 6 FRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDD 65
Query: 403 VVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQ 582
VVIE++ NQLE K P K MQINLTGFLNGKNAR FMGELW LLLSAQ + GIP +F +
Sbjct: 66 VVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLE 125
Query: 583 QKKEEIKKRMEEQ--------QNKDKDK 642
KKEEIK+R EQ Q++DKDK
Sbjct: 126 LKKEEIKQRQIEQEKLASMKKQDEDKDK 153
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 193 bits (471), Expect = 7e-49
Identities = 95/148 (64%), Positives = 116/148 (78%), Gaps = 8/148 (5%)
Frame = +1
Query: 223 YTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILNMEDD 402
+ GTS EQD RFS+K+KKL+KQ+KF +CL ++VDMSKV L+V+KPWIT+++TEIL EDD
Sbjct: 6 FRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDD 65
Query: 403 VVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQ 582
VVIE++ NQLE K P K MQINLTGFLNGKNAR FMGELW LLLSAQ + GIP +F +
Sbjct: 66 VVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLE 125
Query: 583 QKKEEIKKRMEEQ--------QNKDKDK 642
KKEEIK+R EQ Q++DKDK
Sbjct: 126 LKKEEIKQRQIEQEKLASMKKQDEDKDK 153
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 193 bits (471), Expect = 7e-49
Identities = 95/148 (64%), Positives = 116/148 (78%), Gaps = 8/148 (5%)
Frame = +1
Query: 223 YTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILNMEDD 402
+ GTS EQD RFS+K+KKL+KQ+KF +CL ++VDMSKV L+V+KPWIT+++TEIL EDD
Sbjct: 6 FRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDD 65
Query: 403 VVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQ 582
VVIE++ NQLE K P K MQINLTGFLNGKNAR FMGELW LLLSAQ + GIP +F +
Sbjct: 66 VVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLE 125
Query: 583 QKKEEIKKRMEEQ--------QNKDKDK 642
KKEEIK+R EQ Q++DKDK
Sbjct: 126 LKKEEIKQRQIEQEKLASMKKQDEDKDK 153
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 193 bits (471), Expect = 7e-49
Identities = 95/148 (64%), Positives = 116/148 (78%), Gaps = 8/148 (5%)
Frame = +1
Query: 223 YTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILNMEDD 402
+ GTS EQD RFS+K+KKL+KQ+KF +CL ++VDMSKV L+V+KPWIT+++TEIL EDD
Sbjct: 6 FRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDD 65
Query: 403 VVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQ 582
VVIE++ NQLE K P K MQINLTGFLNGKNAR FMGELW LLLSAQ + GIP +F +
Sbjct: 66 VVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLE 125
Query: 583 QKKEEIKKRMEEQ--------QNKDKDK 642
KKEEIK+R EQ Q++DKDK
Sbjct: 126 LKKEEIKQRQIEQEKLASMKKQDEDKDK 153
>BC001954-1|AAH01954.1| 683|Homo sapiens PRP3 pre-mRNA processing
factor 3 homolog (S. cerevisiae) protein.
Length = 683
Score = 40.3 bits (90), Expect = 0.010
Identities = 27/105 (25%), Positives = 51/105 (48%)
Frame = +1
Query: 325 MSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNAR 504
+SK +LD LKPWI + + +L + V+ N + + KK +L FL+ R
Sbjct: 3 LSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMD-KKKAADHLKPFLDDSTLR 61
Query: 505 LFMGELWELLLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKD 639
F+ +L+E + ++S + S + +K E+K+ + K+
Sbjct: 62 -FVDKLFEAVEEGRSSRHS-KSSSDRSRKRELKEVFGDDSEISKE 104
>BC000184-1|AAH00184.1| 683|Homo sapiens PRP3 pre-mRNA processing
factor 3 homolog (S. cerevisiae) protein.
Length = 683
Score = 40.3 bits (90), Expect = 0.010
Identities = 27/105 (25%), Positives = 51/105 (48%)
Frame = +1
Query: 325 MSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNAR 504
+SK +LD LKPWI + + +L + V+ N + + KK +L FL+ R
Sbjct: 3 LSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMD-KKKAADHLKPFLDDSTLR 61
Query: 505 LFMGELWELLLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKD 639
F+ +L+E + ++S + S + +K E+K+ + K+
Sbjct: 62 -FVDKLFEAVEEGRSSRHS-KSSSDRSRKRELKEVFGDDSEISKE 104
>AL611942-1|CAH70312.1| 683|Homo sapiens PRP3 pre-mRNA processing
factor 3 homolog (S. cerevisiae) protein.
Length = 683
Score = 40.3 bits (90), Expect = 0.010
Identities = 27/105 (25%), Positives = 51/105 (48%)
Frame = +1
Query: 325 MSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNAR 504
+SK +LD LKPWI + + +L + V+ N + + KK +L FL+ R
Sbjct: 3 LSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMD-KKKAADHLKPFLDDSTLR 61
Query: 505 LFMGELWELLLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKD 639
F+ +L+E + ++S + S + +K E+K+ + K+
Sbjct: 62 -FVDKLFEAVEEGRSSRHS-KSSSDRSRKRELKEVFGDDSEISKE 104
>AK222825-1|BAD96545.1| 683|Homo sapiens PRP3 pre-mRNA processing
factor 3 homolog protein.
Length = 683
Score = 40.3 bits (90), Expect = 0.010
Identities = 27/105 (25%), Positives = 51/105 (48%)
Frame = +1
Query: 325 MSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNAR 504
+SK +LD LKPWI + + +L + V+ N + + KK +L FL+ R
Sbjct: 3 LSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMD-KKKAADHLKPFLDDSTLR 61
Query: 505 LFMGELWELLLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKD 639
F+ +L+E + ++S + S + +K E+K+ + K+
Sbjct: 62 -FVDKLFEAVEEGRSSRHS-KSSSDRSRKRELKEVFGDDSEISKE 104
>AF016370-1|AAC51926.1| 683|Homo sapiens U4/U6 small nuclear
ribonucleoprotein hPrp3 protein.
Length = 683
Score = 40.3 bits (90), Expect = 0.010
Identities = 27/105 (25%), Positives = 51/105 (48%)
Frame = +1
Query: 325 MSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNAR 504
+SK +LD LKPWI + + +L + V+ N + + KK +L FL+ R
Sbjct: 3 LSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMD-KKKAADHLKPFLDDSTLR 61
Query: 505 LFMGELWELLLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKD 639
F+ +L+E + ++S + S + +K E+K+ + K+
Sbjct: 62 -FVDKLFEAVEEGRSSRHS-KSSSDRSRKRELKEVFGDDSEISKE 104
>AF001947-1|AAC09069.1| 682|Homo sapiens U4/U6-associated RNA
splicing factor protein.
Length = 682
Score = 40.3 bits (90), Expect = 0.010
Identities = 27/105 (25%), Positives = 51/105 (48%)
Frame = +1
Query: 325 MSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNAR 504
+SK +LD LKPWI + + +L + V+ N + + KK +L FL+ R
Sbjct: 3 LSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMD-KKKAADHLKPFLDDSTLR 61
Query: 505 LFMGELWELLLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKD 639
F+ +L+E + ++S + S + +K E+K+ + K+
Sbjct: 62 -FVDKLFEAVEEGRSSRHS-KSSSDRSRKRELKEVFGDDSEISKE 104
>BC033094-1|AAH33094.1| 1332|Homo sapiens inhibitor of kappa light
polypeptide gene enhancer in B-cells, kinase complex-a
protein.
Length = 1332
Score = 35.5 bits (78), Expect = 0.27
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +1
Query: 433 EEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQQKKEEIKKRM 612
+E F C +K++INL + N ++F+G + E + S N I FT+ K+E++ K M
Sbjct: 739 KEAFECMRKLRINL-NLIYDHNPKVFLGNV-ETFIKQIDSVNHINLFFTELKEEDVTKTM 796
>AL359692-2|CAI40569.1| 1332|Homo sapiens inhibitor of kappa light
polypeptide gene enhancer in B-cells, kinase complex-a
protein.
Length = 1332
Score = 35.5 bits (78), Expect = 0.27
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +1
Query: 433 EEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQQKKEEIKKRM 612
+E F C +K++INL + N ++F+G + E + S N I FT+ K+E++ K M
Sbjct: 739 KEAFECMRKLRINL-NLIYDHNPKVFLGNV-ETFIKQIDSVNHINLFFTELKEEDVTKTM 796
>AL354797-1|CAI39465.1| 1332|Homo sapiens inhibitor of kappa light
polypeptide gene enhancer in B-cells, kinase complex-a
protein.
Length = 1332
Score = 35.5 bits (78), Expect = 0.27
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +1
Query: 433 EEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQQKKEEIKKRM 612
+E F C +K++INL + N ++F+G + E + S N I FT+ K+E++ K M
Sbjct: 739 KEAFECMRKLRINL-NLIYDHNPKVFLGNV-ETFIKQIDSVNHINLFFTELKEEDVTKTM 796
>AF153419-1|AAG43369.1| 1332|Homo sapiens IkappaBkinase
complex-associated protein protein.
Length = 1332
Score = 35.5 bits (78), Expect = 0.27
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +1
Query: 433 EEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQQKKEEIKKRM 612
+E F C +K++INL + N ++F+G + E + S N I FT+ K+E++ K M
Sbjct: 739 KEAFECMRKLRINL-NLIYDHNPKVFLGNV-ETFIKQIDSVNHINLFFTELKEEDVTKTM 796
>AB210033-1|BAE06115.1| 1342|Homo sapiens IKBKAP variant protein
protein.
Length = 1342
Score = 35.5 bits (78), Expect = 0.27
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +1
Query: 433 EEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQQKKEEIKKRM 612
+E F C +K++INL + N ++F+G + E + S N I FT+ K+E++ K M
Sbjct: 749 KEAFECMRKLRINL-NLIYDHNPKVFLGNV-ETFIKQIDSVNHINLFFTELKEEDVTKTM 806
>AF044195-1|AAC64258.1| 1332|Homo sapiens IkappaB kinase complex
associated protein protein.
Length = 1332
Score = 35.1 bits (77), Expect = 0.36
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +1
Query: 433 EEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQQKKEEIKKRM 612
+E F C +K++INL + N ++F+G + E + S N I FT+ K+E++ K M
Sbjct: 739 KEAFECMRKLRINLNPIYD-HNPKVFLGNV-ETFIKQIDSVNHINLFFTELKEEDVTKTM 796
>U69140-1|AAB40661.1| 249|Homo sapiens zyginII protein.
Length = 249
Score = 33.1 bits (72), Expect = 1.5
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 379 EILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASEN 558
E+ N V+IE Q E K KK ++ NGKN R M + + +N
Sbjct: 150 EVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPGTYLTTVIPYEKKN 209
Query: 559 GIPESFTQQKKEEIKKRMEEQQNK 630
G P Q +I + M+E K
Sbjct: 210 GPPSVEDLQILTKILRAMKEDSEK 233
>U60061-1|AAC51283.1| 153|Homo sapiens FEZ2 protein.
Length = 153
Score = 33.1 bits (72), Expect = 1.5
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 379 EILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASEN 558
E+ N V+IE Q E K KK ++ NGKN R M + + +N
Sbjct: 54 EVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPGTYLTTVIPYEKKN 113
Query: 559 GIPESFTQQKKEEIKKRMEEQQNK 630
G P Q +I + M+E K
Sbjct: 114 GPPSVEDLQILTKILRAMKEDSEK 137
>BX537785-1|CAD97842.1| 182|Homo sapiens hypothetical protein
protein.
Length = 182
Score = 33.1 bits (72), Expect = 1.5
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 379 EILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASEN 558
E+ N V+IE Q E K KK ++ NGKN R M + + +N
Sbjct: 83 EVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPGTYLTTVIPYEKKN 142
Query: 559 GIPESFTQQKKEEIKKRMEEQQNK 630
G P Q +I + M+E K
Sbjct: 143 GPPSVEDLQILTKILRAMKEDSEK 166
>AF113124-1|AAF14865.1| 320|Homo sapiens FEZ2 protein protein.
Length = 320
Score = 33.1 bits (72), Expect = 1.5
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 379 EILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASEN 558
E+ N V+IE Q E K KK ++ NGKN R M + + +N
Sbjct: 221 EVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPGTYLTTVIPYEKKN 280
Query: 559 GIPESFTQQKKEEIKKRMEEQQNK 630
G P Q +I + M+E K
Sbjct: 281 GPPSVEDLQILTKILRAMKEDSEK 304
>AC007401-1|AAY14650.1| 353|Homo sapiens unknown protein.
Length = 353
Score = 33.1 bits (72), Expect = 1.5
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 379 EILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASEN 558
E+ N V+IE Q E K KK ++ NGKN R M + + +N
Sbjct: 254 EVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPGTYLTTVIPYEKKN 313
Query: 559 GIPESFTQQKKEEIKKRMEEQQNK 630
G P Q +I + M+E K
Sbjct: 314 GPPSVEDLQILTKILRAMKEDSEK 337
>AB076184-1|BAD06207.1| 353|Homo sapiens fasciculation and
elongation protein zeta 2 protein.
Length = 353
Score = 33.1 bits (72), Expect = 1.5
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 379 EILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASEN 558
E+ N V+IE Q E K KK ++ NGKN R M + + +N
Sbjct: 254 EVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPGTYLTTVIPYEKKN 313
Query: 559 GIPESFTQQKKEEIKKRMEEQQNK 630
G P Q +I + M+E K
Sbjct: 314 GPPSVEDLQILTKILRAMKEDSEK 337
>DQ072116-1|AAY57326.1| 147|Homo sapiens polymerase (DNA directed),
epsilon 3 (p17 subunit) protein.
Length = 147
Score = 31.5 bits (68), Expect = 4.4
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 361 ITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNA---RLFMGELWEL 531
I+++ ++ V + Y T+ K+ +N + L+ + F+ L E
Sbjct: 29 ISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEA 88
Query: 532 LLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKDKE 645
L + + + G E+ Q+KK++ KK E+Q+K +D++
Sbjct: 89 LEAYRREQKGKKEASEQKKKDKDKKTDSEEQDKSRDED 126
>BC004170-1|AAH04170.1| 147|Homo sapiens polymerase (DNA directed),
epsilon 3 (p17 subunit) protein.
Length = 147
Score = 31.5 bits (68), Expect = 4.4
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 361 ITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNA---RLFMGELWEL 531
I+++ ++ V + Y T+ K+ +N + L+ + F+ L E
Sbjct: 29 ISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEA 88
Query: 532 LLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKDKE 645
L + + + G E+ Q+KK++ KK E+Q+K +D++
Sbjct: 89 LEAYRREQKGKKEASEQKKKDKDKKTDSEEQDKSRDED 126
>BC003166-1|AAH03166.1| 147|Homo sapiens polymerase (DNA directed),
epsilon 3 (p17 subunit) protein.
Length = 147
Score = 31.5 bits (68), Expect = 4.4
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 361 ITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNA---RLFMGELWEL 531
I+++ ++ V + Y T+ K+ +N + L+ + F+ L E
Sbjct: 29 ISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEA 88
Query: 532 LLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKDKE 645
L + + + G E+ Q+KK++ KK E+Q+K +D++
Sbjct: 89 LEAYRREQKGKKEASEQKKKDKDKKTDSEEQDKSRDED 126
>AY720898-1|AAU15052.1| 147|Homo sapiens arsenic transactivated
protein protein.
Length = 147
Score = 31.5 bits (68), Expect = 4.4
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 361 ITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNA---RLFMGELWEL 531
I+++ ++ V + Y T+ K+ +N + L+ + F+ L E
Sbjct: 29 ISKEARSAISRAASVFVLYATSCANNFAMNGKRKTLNASDVLSAMEEMEFQRFVTPLKEA 88
Query: 532 LLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKDKE 645
L + + + G E+ Q+KK++ KK E+Q+K +D++
Sbjct: 89 LEAYRREQKGKKEASEQKKKDKDKKTDSEEQDKSRDED 126
>AL137066-5|CAH70100.1| 147|Homo sapiens polymerase (DNA directed),
epsilon 3 (p17 subunit) protein.
Length = 147
Score = 31.5 bits (68), Expect = 4.4
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 361 ITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNA---RLFMGELWEL 531
I+++ ++ V + Y T+ K+ +N + L+ + F+ L E
Sbjct: 29 ISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEA 88
Query: 532 LLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKDKE 645
L + + + G E+ Q+KK++ KK E+Q+K +D++
Sbjct: 89 LEAYRREQKGKKEASEQKKKDKDKKTDSEEQDKSRDED 126
>AK074782-1|BAC11206.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ90301 fis, clone NT2RP2000610, weakly similar to
CCAAT-BINDING TRANSCRIPTION FACTOR SUBUNIT A. ).
Length = 147
Score = 31.5 bits (68), Expect = 4.4
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 361 ITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNA---RLFMGELWEL 531
I+++ ++ V + Y T+ K+ +N + L+ + F+ L E
Sbjct: 29 ISKEARSAISRAASVFVLYATSCANNFAMNGKRKTLNASDVLSAMEEMEFQRFVTPLKEA 88
Query: 532 LLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKDKE 645
L + + + G E+ Q+KK++ KK E+Q+K +D++
Sbjct: 89 LEAYRREQKGKKEASEQKKKDKDKKTDSEEQDKSRDED 126
>AK074629-1|BAC11099.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ90148 fis, clone HEMBB1001959, weakly similar to
CCAAT-BINDING TRANSCRIPTION FACTOR SUBUNIT A. ).
Length = 147
Score = 31.5 bits (68), Expect = 4.4
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 361 ITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNA---RLFMGELWEL 531
I+++ ++ V + Y T+ K+ +N + L+ + F+ L E
Sbjct: 29 ISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEA 88
Query: 532 LLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKDKE 645
L + + + G E+ Q+KK++ KK E+Q+K +D++
Sbjct: 89 LEAYRREQKGKKEASEQKKKDKDKKTDSEEQDKSRDED 126
>AF261689-1|AAF90133.1| 147|Homo sapiens DNA polymerase epsilon p17
subunit protein.
Length = 147
Score = 31.5 bits (68), Expect = 4.4
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 361 ITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNA---RLFMGELWEL 531
I+++ ++ V + Y T+ K+ +N + L+ + F+ L E
Sbjct: 29 ISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEA 88
Query: 532 LLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKDKE 645
L + + + G E+ Q+KK++ KK E+Q+K +D++
Sbjct: 89 LEAYRREQKGKKEASEQKKKDKDKKTDSEEQDKSRDED 126
>AF226077-1|AAF72417.1| 147|Homo sapiens CHRAC17 protein.
Length = 147
Score = 31.5 bits (68), Expect = 4.4
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 361 ITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNA---RLFMGELWEL 531
I+++ ++ V + Y T+ K+ +N + L+ + F+ L E
Sbjct: 29 ISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEA 88
Query: 532 LLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKDKE 645
L + + + G E+ Q+KK++ KK E+Q+K +D++
Sbjct: 89 LEAYRREQKGKKEASEQKKKDKDKKTDSEEQDKSRDED 126
>BC110386-1|AAI10387.1| 353|Homo sapiens fasciculation and
elongation protein zeta 2 (zygin II) protein.
Length = 353
Score = 31.1 bits (67), Expect = 5.9
Identities = 24/84 (28%), Positives = 33/84 (39%)
Frame = +1
Query: 379 EILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASEN 558
E+ N V+IE Q E K KK ++ NGKN R M + + +N
Sbjct: 254 EVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPGTYLTTVIPYEKKN 313
Query: 559 GIPESFTQQKKEEIKKRMEEQQNK 630
G P Q +I M+E K
Sbjct: 314 GPPSVEDLQILTKILCAMKEDSEK 337
>BC146779-1|AAI46780.1| 1669|Homo sapiens intersectin 2 protein.
Length = 1669
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 520 LWELLLSAQASENG--IPESFTQQKKEEIKKRMEEQQNKDKD 639
LW+ L + E + E TQ+K +E +++ EE+Q KDKD
Sbjct: 675 LWKENLRKEEEEKQKRLQEEKTQEKIQEEERKAEEKQRKDKD 716
>AK074762-1|BAC11190.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ90281 fis, clone NT2RP1000468, weakly similar to
CCAAT-BINDING TRANSCRIPTION FACTOR SUBUNIT A . ).
Length = 147
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 361 ITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNA---RLFMGELWEL 531
I+++ ++ V + Y T+ K+ +N + L+ + F+ L E
Sbjct: 29 ISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVIPLKEA 88
Query: 532 LLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKDKE 645
L + + + G E+ Q+KK++ KK E+Q+K +D++
Sbjct: 89 LEAYRREQKGKKEASEQKKKDKDKKTDSEEQDKSRDED 126
>AF248540-1|AAF63600.1| 1681|Homo sapiens intersectin 2 protein.
Length = 1681
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 520 LWELLLSAQASENG--IPESFTQQKKEEIKKRMEEQQNKDKD 639
LW+ L + E + E TQ+K +E +++ EE+Q KDKD
Sbjct: 687 LWKENLRKEEEEKQKRLQEEKTQEKIQEEERKAEEKQRKDKD 728
>AF182199-1|AAF59904.1| 1248|Homo sapiens intersectin 2 short
isoform protein.
Length = 1248
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 520 LWELLLSAQASENG--IPESFTQQKKEEIKKRMEEQQNKDKD 639
LW+ L + E + E TQ+K +E +++ EE+Q KDKD
Sbjct: 702 LWKENLRKEEEEKQKRLQEEKTQEKIQEEERKAEEKQRKDKD 743
>AF182198-1|AAF59903.1| 1696|Homo sapiens intersectin 2 long isoform
protein.
Length = 1696
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 520 LWELLLSAQASENG--IPESFTQQKKEEIKKRMEEQQNKDKD 639
LW+ L + E + E TQ+K +E +++ EE+Q KDKD
Sbjct: 702 LWKENLRKEEEEKQKRLQEEKTQEKIQEEERKAEEKQRKDKD 743
>AC009228-1|AAX93122.1| 1329|Homo sapiens unknown protein.
Length = 1329
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 520 LWELLLSAQASENG--IPESFTQQKKEEIKKRMEEQQNKDKD 639
LW+ L + E + E TQ+K +E +++ EE+Q KDKD
Sbjct: 702 LWKENLRKEEEEKQKRLQEEKTQEKIQEEERKAEEKQRKDKD 743
>AB033082-1|BAA86570.1| 1676|Homo sapiens KIAA1256 protein protein.
Length = 1676
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 520 LWELLLSAQASENG--IPESFTQQKKEEIKKRMEEQQNKDKD 639
LW+ L + E + E TQ+K +E +++ EE+Q KDKD
Sbjct: 682 LWKENLRKEEEEKQKRLQEEKTQEKIQEEERKAEEKQRKDKD 723
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,057,603
Number of Sequences: 237096
Number of extensions: 1800786
Number of successful extensions: 13296
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 12665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13272
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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