Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_H05
(918 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 161 5e-40
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z78016-4|CAC42335.1| 359|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z75954-4|CAB00109.1| 273|Caenorhabditis elegans Hypothetical pr... 29 4.7
U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine rec... 29 4.7
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla... 29 4.7
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ... 29 4.7
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 29 6.2
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 29 6.2
AL132876-7|CAD21659.1| 449|Caenorhabditis elegans Hypothetical ... 29 6.2
AL110478-3|CAB54348.1| 380|Caenorhabditis elegans Hypothetical ... 29 6.2
Z34801-7|CAJ76938.1| 85|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z34801-6|CAA84329.1| 428|Caenorhabditis elegans Hypothetical pr... 28 8.1
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 28 8.1
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 28 8.1
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 161 bits (392), Expect = 5e-40
Identities = 70/139 (50%), Positives = 103/139 (74%)
Frame = +1
Query: 223 YTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILNMEDD 402
+ G ++EQD RFSDKEKKL+K MKF L Q++D+++ +DV+KPWIT ++ +IL MEDD
Sbjct: 6 FRGANSEQDGRFSDKEKKLLKTMKFEPQLEQKIDLNRCNMDVIKPWITARVNDILGMEDD 65
Query: 403 VVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQ 582
VV+EY+ +Q+++K PK +QIN+TGFLN + AR F+G+LW LL+ A ASE+GIP S
Sbjct: 66 VVVEYILSQIDDKNLNPKLLQINVTGFLNARRAREFVGDLWNLLIEANASEDGIPASLVN 125
Query: 583 QKKEEIKKRMEEQQNKDKD 639
QK E+K +++ D++
Sbjct: 126 QKMAEMKTNDRDEKGDDRE 144
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 343 DVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGEL 522
D ++PW+ +K+T+ L ED +++ +Q+ EK P+++ ++ ++ ++A F+ ++
Sbjct: 632 DRIRPWVAKKVTQFLGEEDKSFCDFICDQI-EKQATPQEILKDVAVIID-EDAEQFVIKM 689
Query: 523 WELLL-SAQASENGI 564
W LL+ QA GI
Sbjct: 690 WRLLIYEGQARRLGI 704
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 343 DVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGEL 522
D ++PW+ +K+T+ L ED +++ +Q+ EK P+++ ++ ++ ++A F+ ++
Sbjct: 632 DRIRPWVAKKVTQFLGEEDKSFCDFICDQI-EKQATPQEILKDVAVIID-EDAEQFVIKM 689
Query: 523 WELLL-SAQASENGI 564
W LL+ QA GI
Sbjct: 690 WRLLIYEGQARRLGI 704
>Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical
protein W04D2.6b protein.
Length = 547
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 343 DVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGEL 522
D ++PW+ +K+T+ L ED +++ +Q+ EK P+++ ++ ++ ++A F+ ++
Sbjct: 474 DRIRPWVAKKVTQFLGEEDKSFCDFICDQI-EKQATPQEILKDVAVIID-EDAEQFVIKM 531
Query: 523 WELLL-SAQASENGI 564
W LL+ QA GI
Sbjct: 532 WRLLIYEGQARRLGI 546
>Z78016-4|CAC42335.1| 359|Caenorhabditis elegans Hypothetical
protein R186.7 protein.
Length = 359
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +1
Query: 493 KNARLFMGELWELLLSAQASENGIPESFTQQKKEEIKKRMEEQQNKD 633
+N RLF + L S + +E ++ Q+K+EE++K++EE + KD
Sbjct: 159 RNRRLFSNLIMGTLSSFKKTEK---KTTQQEKQEEVEKKLEETKKKD 202
>Z75954-4|CAB00109.1| 273|Caenorhabditis elegans Hypothetical
protein F58H1.6 protein.
Length = 273
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 538 SAQASENGIPESFTQQKKEEIKKRMEEQQNKDKDKE 645
+ ASE G+ + T QK++ IKK+ E+ + + KE
Sbjct: 177 TTMASERGMTMTQTIQKEKSIKKKKSEKDERKRAKE 212
>U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine
receptor, class sx protein24 protein.
Length = 303
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -2
Query: 545 CALSNSSHNSPMKRRAFFPFRNPVKLICIF-FGHGNFSSSWLVTYSMTTSSSMFRI 381
C LS + H P K F F V +I ++ H NF + T M T+ S+ RI
Sbjct: 152 CLLSTALHGIPFKIWQFMNFFITVAVIFVYSLAHINFQTLKKSTVHMKTAKSVDRI 207
>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
protein 8 protein.
Length = 1206
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 346 VLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNA 501
V+KP I Q ++LNM+ +I+ N E P +++++N+ +LN K +
Sbjct: 867 VVKPTIPQN--KVLNMDLSALIQDCWNTTPEMRPSLRRIKLNVETYLNIKGS 916
>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1152
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 346 VLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNA 501
V+KP I Q ++LNM+ +I+ N E P +++++N+ +LN K +
Sbjct: 813 VVKPTIPQN--KVLNMDLSALIQDCWNTTPEMRPSLRRIKLNVETYLNIKGS 862
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 325 MSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLE 435
+S +K DVL P I + I+N+E DV +E +T E
Sbjct: 138 VSYIKRDVLFPQIMPRDMIIVNVEIDVAVETITTTNE 174
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 325 MSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLE 435
+S +K DVL P I + I+N+E DV +E +T E
Sbjct: 138 VSYIKRDVLFPQIMPRDMIIVNVEIDVAVETITTTNE 174
>AL132876-7|CAD21659.1| 449|Caenorhabditis elegans Hypothetical
protein Y105E8A.8 protein.
Length = 449
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/75 (21%), Positives = 36/75 (48%)
Frame = +1
Query: 421 TNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPESFTQQKKEEI 600
+ +LEEK P + + + L+ + ++ EL + A+ IPE + +
Sbjct: 9 SQELEEKKPSLRAERCGIASLLSSLRSDHLASKIDELSTTEAAASEEIPEEIPENRPLNR 68
Query: 601 KKRMEEQQNKDKDKE 645
K++ + Q+ ++ D+E
Sbjct: 69 KEKRKLQRMQEIDQE 83
>AL110478-3|CAB54348.1| 380|Caenorhabditis elegans Hypothetical
protein Y26D4A.8 protein.
Length = 380
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/37 (35%), Positives = 26/37 (70%)
Frame = +1
Query: 532 LLSAQASENGIPESFTQQKKEEIKKRMEEQQNKDKDK 642
LLS +A+E+ IP+ +++ KEE K+ +E+ +D+ +
Sbjct: 332 LLSLEAAES-IPQEHSEENKEERKEEKKEEIREDEQE 367
>Z34801-7|CAJ76938.1| 85|Caenorhabditis elegans Hypothetical
protein F59A2.4b protein.
Length = 85
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +1
Query: 250 TRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKP--WITQKI---TEILNMEDDV 405
+R + ++ ++K FG CL +VD+ K + +L P I K+ ++I +++D +
Sbjct: 27 SRSTKADENVLKSPVFGFCLVTEVDLEKRTMSILCPQRTIPSKVLVFSDITHLDDQI 83
>Z34801-6|CAA84329.1| 428|Caenorhabditis elegans Hypothetical
protein F59A2.4a protein.
Length = 428
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +1
Query: 250 TRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKP--WITQKI---TEILNMEDDV 405
+R + ++ ++K FG CL +VD+ K + +L P I K+ ++I +++D +
Sbjct: 370 SRSTKADENVLKSPVFGFCLVTEVDLEKRTMSILCPQRTIPSKVLVFSDITHLDDQI 426
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 535 LSAQASENGIPESFTQQ-KKEEIKKRMEEQQNKDKDKE 645
+S +A E+ ++ ++ KK E++KR+EE NK K K+
Sbjct: 1 MSEEAGEDAQRKAAEREAKKAEVRKRLEEAGNKKKAKK 38
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 535 LSAQASENGIPESFTQQ-KKEEIKKRMEEQQNKDKDKE 645
+S +A E+ ++ ++ KK E++KR+EE NK K K+
Sbjct: 1 MSEEAGEDAQRKAAEREAKKAEVRKRLEEAGNKKKAKK 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,845,942
Number of Sequences: 27780
Number of extensions: 302811
Number of successful extensions: 1370
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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