Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_H02
         (933 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069635-1|AAL39780.1|  330|Drosophila melanogaster LD40326p pro...    43   7e-04
AE014296-2014|AAF50022.2|  330|Drosophila melanogaster CG7319-PA...    43   7e-04
AE014296-2013|AAS65037.1|  518|Drosophila melanogaster CG7319-PC...    43   7e-04

>AY069635-1|AAL39780.1|  330|Drosophila melanogaster LD40326p
           protein.
          Length = 330

 Score = 42.7 bits (96), Expect = 7e-04
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = +1

Query: 139 RPFQITNMEFARLCEAYNDIIKQHPEFEHYDYRAPKN 249
           RPF++T  +  RL E Y++ +   PE   YDYRAPKN
Sbjct: 290 RPFELTVEQCLRLAEVYSEHLVTRPEVAAYDYRAPKN 326


>AE014296-2014|AAF50022.2|  330|Drosophila melanogaster CG7319-PA,
           isoform A protein.
          Length = 330

 Score = 42.7 bits (96), Expect = 7e-04
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = +1

Query: 139 RPFQITNMEFARLCEAYNDIIKQHPEFEHYDYRAPKN 249
           RPF++T  +  RL E Y++ +   PE   YDYRAPKN
Sbjct: 290 RPFELTVEQCLRLAEVYSEHLVTRPEVAAYDYRAPKN 326


>AE014296-2013|AAS65037.1|  518|Drosophila melanogaster CG7319-PC,
           isoform C protein.
          Length = 518

 Score = 42.7 bits (96), Expect = 7e-04
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = +1

Query: 139 RPFQITNMEFARLCEAYNDIIKQHPEFEHYDYRAPKN 249
           RPF++T  +  RL E Y++ +   PE   YDYRAPKN
Sbjct: 478 RPFELTVEQCLRLAEVYSEHLVTRPEVAAYDYRAPKN 514


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,167,693
Number of Sequences: 53049
Number of extensions: 413778
Number of successful extensions: 875
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4607820675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)