Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_G23
(946 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 32 0.022
AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription fact... 30 0.12
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 25 2.5
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 25 3.3
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 25 4.4
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 24 5.8
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 24 5.8
AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase p... 24 7.7
AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein. 24 7.7
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 32.3 bits (70), Expect = 0.022
Identities = 16/62 (25%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +2
Query: 554 QQTAEVYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVRAG---NQEKFQQLESAI 724
QQ E + +++ +A K DE L++M +L + ++ ++K++ N+++ QQL +
Sbjct: 715 QQRREQLQRELNELNSAYAKEDERLQEMTRKLHQRQQHMKKLQQELLTNEQQLQQLAGVV 774
Query: 725 XE 730
E
Sbjct: 775 FE 776
Score = 25.4 bits (53), Expect = 2.5
Identities = 20/99 (20%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Frame = +2
Query: 440 LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAI---EDKMTTAAD 610
L++ +E+ + +L R + H++ +++ LT EQQ ++ + E + TT +
Sbjct: 728 LNSAYAKEDERLQEMTRKLHQR-QQHMKKLQQELLTNEQQLQQLAGVVFEGETEETTLRE 786
Query: 611 KRDEN---LKKMIERLREHEEQVRKVRAGNQEKFQQLES 718
+ + + L K+ + + E + ++ +VR Q++ Q ++
Sbjct: 787 ELEHSRTILAKLQKGIEEEQAKLDQVRRTVQQEEQTAQA 825
>AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription factor
protein.
Length = 391
Score = 29.9 bits (64), Expect = 0.12
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = +2
Query: 440 LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD 619
+D+ ++ + A +SRLK E K + +T E E+ + A
Sbjct: 126 IDSGRKSFRKSTAAKTAATQSRLKQRFEAERKRTRVI--RTEEYIPTQEELLEEAEITER 183
Query: 620 ENLKKMIERLREHEEQVRKVRAGNQE 697
EN+K + ER R E + +K+R N++
Sbjct: 184 ENIKSL-ERFRRMELEKQKIRPTNKK 208
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 25.4 bits (53), Expect = 2.5
Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 358 SEDGQDRGSVSHPQRADE*--LHRRYQGGARRQDGDPRGKTRGLHQR 492
++ G + V+ PQ++ + HR++Q +Q+G + + G+HQ+
Sbjct: 248 NQRGNKQNGVNLPQQSAQRQPAHRQHQQWPHQQNGQQQQQRMGIHQQ 294
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 25.0 bits (52), Expect = 3.3
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 386 SRIRSEQTNNFIVATKEAL-DAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 562
S+ R + + + +E L DAK++ HE+ R E+ K + GV + + Q T
Sbjct: 476 SKERIHELQSELDNVREQLGDAKIDKHEDARRKKKQEVVELFKLEVPGVYDRMINMCQPT 535
Query: 563 AEVYKAIEDKM 595
+ Y K+
Sbjct: 536 HKRYNVAVTKV 546
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 24.6 bits (51), Expect = 4.4
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Frame = +2
Query: 467 EKREAYINELRSRLKDHLE-GVEKTRLTLEQ--QTAEVYKAIEDKMTTAADKRDENLKKM 637
EK++A +NEL + +++ +E +EK R E + +V + IE R L K
Sbjct: 186 EKKDAKLNELYAVIREEIEPKLEKLRKEREHYIEFQKVCRDIEYLTRLYVSYRYLQLCKG 245
Query: 638 IERLREHEEQVRKVRAGNQEKFQQLESAIXENCSRRDXLSXXQK 769
+E E E + +++ E Q++ES NC+ L K
Sbjct: 246 VE---ESERTIANLQSVIGESEQKIES----NCATAQTLEQEAK 282
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 24.2 bits (50), Expect = 5.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 587 DKMTTAADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIXEN 733
D+M +D ++ +L R + E R +RA + FQ+L A EN
Sbjct: 368 DRMQQTSDLQNRSLAAAQYRTAKAELD-RAIRASKKAAFQELIDAAEEN 415
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 24.2 bits (50), Expect = 5.8
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 469 KTRGLHQRAA-LPSQGSS*GC*EDQVDPGTADRGSVQ 576
+TR + +R LP +G+ G PGT DR S+Q
Sbjct: 2 ETRSMRKRTTRLPEEGAPTGA-----GPGTGDRASIQ 33
>AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 23.8 bits (49), Expect = 7.7
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -3
Query: 233 TPTGSASITSYARPPXDISWXRISVDLVSTSMAST 129
TP S+ +ARP +++ +S+ +T +A T
Sbjct: 650 TPNSVGSLQEFARPYRNMATTPVSIRFTNTVIART 684
>AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein.
Length = 179
Score = 23.8 bits (49), Expect = 7.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 548 LEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLRE 655
L+ + + K +E + T + D+N KK IER E
Sbjct: 36 LKGEVEKQSKKLEKRKETLGESLDKNHKKKIERDEE 71
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,369
Number of Sequences: 2352
Number of extensions: 9150
Number of successful extensions: 36
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103362750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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