Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_G20
(974 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.31
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.31
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.31
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.31
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.71
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.71
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.71
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 31 1.6
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 29 3.8
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 5.0
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 6.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 28 8.8
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 8.8
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.1 bits (72), Expect = 0.31
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 337 GGXXXPPPXXGAPXPPPP 284
GG PPP GAP PPPP
Sbjct: 102 GGIPPPPPMFGAPPPPPP 119
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 349 PXGGGGXXXPPPXXGAPXPPPP 284
P G GG PPP PPPP
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPP 98
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 349 PXGGGGXXXPPPXXGAPXPPPP 284
P GG PPP G PPPP
Sbjct: 88 PMFAGGIPPPPPMMGGIPPPPP 109
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.31
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 349 PXGGGGXXXPPPXXGAPXPPPP 284
P GG PPP G P PPPP
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPP 774
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 5/50 (10%)
Frame = -2
Query: 406 PPPXXXXXXXXXXXXXXXXPXGG-----GGXXXPPPXXGAPXPPPPXXXP 272
PPP P GG GG PPP G PPPP P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.31
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 349 PXGGGGXXXPPPXXGAPXPPPP 284
P GG PPP G P PPPP
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPP 774
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 5/50 (10%)
Frame = -2
Query: 406 PPPXXXXXXXXXXXXXXXXPXGG-----GGXXXPPPXXGAPXPPPPXXXP 272
PPP P GG GG PPP G PPPP P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.31
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 349 PXGGGGXXXPPPXXGAPXPPPP 284
P GG PPP G P PPPP
Sbjct: 336 PISGGPPPPPPPPGGCPPPPPP 357
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 5/50 (10%)
Frame = -2
Query: 406 PPPXXXXXXXXXXXXXXXXPXGG-----GGXXXPPPXXGAPXPPPPXXXP 272
PPP P GG GG PPP G PPPP P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.71
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 406 PPPXXXXXXXXXXXXXXXXPXGGGGXXXPPPXXGAPXPPPP 284
PPP P GG PPP G+P PPPP
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSP--PPPRAGSPPPPPP 302
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -2
Query: 409 GPPPXXXXXXXXXXXXXXXXPXGGGGXXXPPPXXGAPXPPPPXXXP 272
G PP P GG PP P PPPP P
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 349 PXGGGGXXXPPPXXGAPXPPPPXXXP 272
P G G PPP G+P PP P
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSPP 273
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.71
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 406 PPPXXXXXXXXXXXXXXXXPXGGGGXXXPPPXXGAPXPPPP 284
PPP P GG PPP G+P PPPP
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSP--PPPRAGSPPPPPP 323
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -2
Query: 409 GPPPXXXXXXXXXXXXXXXXPXGGGGXXXPPPXXGAPXPPPPXXXP 272
G PP P GG PP P PPPP P
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 349 PXGGGGXXXPPPXXGAPXPPPPXXXP 272
P G G PPP G+P PP P
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSPP 294
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.71
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 406 PPPXXXXXXXXXXXXXXXXPXGGGGXXXPPPXXGAPXPPPP 284
PPP P GG PPP G+P PPPP
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSP--PPPRAGSPPPPPP 308
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = -2
Query: 409 GPPPXXXXXXXXXXXXXXXXPXGGGGXXXPPPXXGAPXPPPPXXXP 272
G PP P GG PP P PPPP P
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 349 PXGGGGXXXPPPXXGAPXPPPPXXXP 272
P G G PPP G+P PP P
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSPP 279
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 273 GXXXGGGGXGAPXXGGGXXXPPPP 344
G GGGG G G G PPPP
Sbjct: 193 GGMGGGGGSGGSGGGSGRFPPPPP 216
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 349 PXGGGGXXXPPPXXGAPXPPPP 284
P GG G PPP GAP PP
Sbjct: 12 PYGGHGGYAPPPVHGAPGYMPP 33
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 349 PXGGGGXXXPPPXXGAPXPPPP 284
P GG G PPP GAP PP
Sbjct: 12 PYGGHGGYAPPPVHGAPGYMPP 33
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 273 GXXXGGGGXGAPXXGGGXXXPPPP 344
G GGGG G GG PPPP
Sbjct: 34 GGCGGGGGCGGGGGCGGGCAPPPP 57
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 273 GXXXGGGGXGAPXXGGGXXXPPPP 344
G GGG G GGG PPPP
Sbjct: 35 GCGGGGGCGGGGGCGGGCAPPPPP 58
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 273 GXXXGGGGXGAPXXGGGXXXPPPP 344
G GGGG G GG PPPP
Sbjct: 91 GCGGGGGGCGGGGGCGGGCAPPPP 114
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 285 GGGGXGAPXXGGGXXXPPPP 344
GGGG GGG PPPP
Sbjct: 25 GGGGYSGGGGGGGDAAPPPP 44
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 322 PPPXXGAPXPPPPXXXP 272
PPP AP PPPP P
Sbjct: 134 PPPTPAAPPPPPPPPPP 150
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 273 GXXXGGGGXGAPXXGGGXXXPPPPXG 350
G G GG G P GG PPP G
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQG 206
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 273 GXXXGGGGXGAPXXGGGXXXPPPPXG 350
G G GG G P GG PPP G
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQG 486
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,315,788
Number of Sequences: 27780
Number of extensions: 142675
Number of successful extensions: 1991
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2531861596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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