Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_G19
         (902 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726...    31   1.7  
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264...    31   1.7  
02_05_0701 + 31022485-31022648,31023569-31023611,31023712-310237...    31   1.7  
01_01_0898 + 7078900-7079079,7080269-7080301,7080480-7080653,708...    30   2.2  
01_05_0663 - 24119355-24120101                                         28   8.8  

>07_01_0875 -
           7265529-7265588,7265681-7265746,7266008-7266293,
           7267138-7267142
          Length = 138

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 21/92 (22%), Positives = 43/92 (46%)
 Frame = +3

Query: 330 VIAAKSSIGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGDSATHM 509
           V+     +   ++ V++++     L  GL  A + + K+   A  C+ AE    D   ++
Sbjct: 14  VLGEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHA--AQLCVLAE--DCDQPDYV 69

Query: 510 QDVLLQAFCVENDIHVIKVDCETKLRRMLGYC 605
           +  L++A C E+++H++ V     L    G C
Sbjct: 70  K--LVKALCAEHNVHLVTVPSAKTLGEWAGLC 99


>07_01_0360 +
           2646279-2646283,2647113-2647398,2648043-2648108,
           2648199-2648258
          Length = 138

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 21/92 (22%), Positives = 43/92 (46%)
 Frame = +3

Query: 330 VIAAKSSIGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGDSATHM 509
           V+     +   ++ V++++     L  GL  A + + K+   A  C+ AE    D   ++
Sbjct: 14  VLGEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHA--AQLCVLAE--DCDQPDYV 69

Query: 510 QDVLLQAFCVENDIHVIKVDCETKLRRMLGYC 605
           +  L++A C E+++H++ V     L    G C
Sbjct: 70  K--LVKALCAEHNVHLVTVPSAKTLGEWAGLC 99


>02_05_0701 +
           31022485-31022648,31023569-31023611,31023712-31023777,
           31024007-31024062,31024091-31024190,31024290-31024472,
           31024953-31025001,31025089-31025169,31025209-31025268,
           31025394-31025514,31025612-31025693,31025783-31025868,
           31026011-31026111,31026246-31026387,31026488-31026638,
           31026710-31026937
          Length = 570

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 486 PGDSATHMQDVLLQAFC-VENDIHVIKVDCETKLRRMLGYC 605
           P +SA H+ DVL    C  ++D  V  V C  +   M GYC
Sbjct: 523 PWESACHVPDVLPTHRCRTDDDCGVEAVSCRRRTCSMAGYC 563


>01_01_0898 + 7078900-7079079,7080269-7080301,7080480-7080653,
            7080866-7083890,7084253-7084596
          Length = 1251

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/46 (28%), Positives = 28/46 (60%)
 Frame = +3

Query: 504  HMQDVLLQAFCVENDIHVIKVDCETKLRRMLGYCSPMDFSCVLVHY 641
            H+++V +++F  E    V+++     L ++L  CS M+F  +++HY
Sbjct: 999  HLEEVAIRSFDAE--CRVLRMARHRNLIKVLNTCSNMEFRALVLHY 1042


>01_05_0663 - 24119355-24120101
          Length = 248

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 552 EYHFQRKMLAGGHLAYALHYRQAGLRRSG 466
           +Y  Q + L   + A +LH RQA LRR G
Sbjct: 204 DYREQVRRLEASNYALSLHLRQADLRRGG 232


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,347,250
Number of Sequences: 37544
Number of extensions: 379435
Number of successful extensions: 878
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)