Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_G19
         (902 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113626-1|AAM29631.1|  163|Drosophila melanogaster RH70774p pro...   123   3e-28
AE013599-321|AAF59278.1|  163|Drosophila melanogaster CG11086-PA...   123   3e-28
X89659-1|CAA61806.1|  151|Drosophila melanogaster 40S ribosomal ...    36   0.057
AY058531-1|AAL13760.1|  139|Drosophila melanogaster LD23808p pro...    36   0.057
AE014296-2235|AAN11844.2|  139|Drosophila melanogaster CG11271-P...    36   0.057
AE014296-2234|AAN11845.1|  139|Drosophila melanogaster CG11271-P...    36   0.057

>AY113626-1|AAM29631.1|  163|Drosophila melanogaster RH70774p
           protein.
          Length = 163

 Score =  123 bits (297), Expect = 3e-28
 Identities = 68/140 (48%), Positives = 89/140 (63%)
 Frame = +3

Query: 351 IGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGDSATHMQDVLLQA 530
           IG+ IK+ L RA  E R+ +GL  AI  LSK+  G+LFCL A+   GDSATHM +VLL+A
Sbjct: 31  IGRTIKSALLRAQSEARVIVGLSAAINVLSKSPEGSLFCLMAQPKDGDSATHMHEVLLEA 90

Query: 531 FCVENDIHVIKVDCETKLRRMLGYCSPMDFSCVLVHYPYTDPFTDSQEIDLSTLSEAERQ 710
           FC ENDI+VIKVD  TKL R+LG  S    SC LV   + D   +        L++AE Q
Sbjct: 91  FCYENDIYVIKVDDATKLSRILGQDSVE--SCCLVQKVWADAPEEQ-------LTKAENQ 141

Query: 711 LIXHCESXWGYSQMPVIKLP 770
           L+ +CE+ W   Q P+++LP
Sbjct: 142 LVDYCEAHWDAPQQPIVQLP 161


>AE013599-321|AAF59278.1|  163|Drosophila melanogaster CG11086-PA
           protein.
          Length = 163

 Score =  123 bits (297), Expect = 3e-28
 Identities = 68/140 (48%), Positives = 89/140 (63%)
 Frame = +3

Query: 351 IGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGDSATHMQDVLLQA 530
           IG+ IK+ L RA  E R+ +GL  AI  LSK+  G+LFCL A+   GDSATHM +VLL+A
Sbjct: 31  IGRTIKSALLRAQSEARVIVGLSAAINVLSKSPEGSLFCLMAQPKDGDSATHMHEVLLEA 90

Query: 531 FCVENDIHVIKVDCETKLRRMLGYCSPMDFSCVLVHYPYTDPFTDSQEIDLSTLSEAERQ 710
           FC ENDI+VIKVD  TKL R+LG  S    SC LV   + D   +        L++AE Q
Sbjct: 91  FCYENDIYVIKVDDATKLSRILGQDSVE--SCCLVQKVWADAPEEQ-------LTKAENQ 141

Query: 711 LIXHCESXWGYSQMPVIKLP 770
           L+ +CE+ W   Q P+++LP
Sbjct: 142 LVDYCEAHWDAPQQPIVQLP 161


>X89659-1|CAA61806.1|  151|Drosophila melanogaster 40S ribosomal
           protein S12 protein.
          Length = 151

 Score = 36.3 bits (80), Expect = 0.057
 Identities = 27/97 (27%), Positives = 45/97 (46%)
 Frame = +3

Query: 315 PRTFSVIAAKSSIGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGD 494
           P    V+     I   ++ VL+++ +   L  G+  A + L K    A+ C+ AE+   D
Sbjct: 21  PSAAPVLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKR--QAVLCILAES--FD 76

Query: 495 SATHMQDVLLQAFCVENDIHVIKVDCETKLRRMLGYC 605
              + +  L+ A C E+ I +I+VD   KL    G C
Sbjct: 77  EPNYKK--LVTALCNEHQIPLIRVDSHKKLGEWSGLC 111


>AY058531-1|AAL13760.1|  139|Drosophila melanogaster LD23808p
           protein.
          Length = 139

 Score = 36.3 bits (80), Expect = 0.057
 Identities = 27/97 (27%), Positives = 45/97 (46%)
 Frame = +3

Query: 315 PRTFSVIAAKSSIGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGD 494
           P    V+     I   ++ VL+++ +   L  G+  A + L K    A+ C+ AE+   D
Sbjct: 9   PSAAPVLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKR--QAVLCILAES--FD 64

Query: 495 SATHMQDVLLQAFCVENDIHVIKVDCETKLRRMLGYC 605
              + +  L+ A C E+ I +I+VD   KL    G C
Sbjct: 65  EPNYKK--LVTALCNEHQIPLIRVDSHKKLGEWSGLC 99


>AE014296-2235|AAN11844.2|  139|Drosophila melanogaster CG11271-PC,
           isoform C protein.
          Length = 139

 Score = 36.3 bits (80), Expect = 0.057
 Identities = 27/97 (27%), Positives = 45/97 (46%)
 Frame = +3

Query: 315 PRTFSVIAAKSSIGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGD 494
           P    V+     I   ++ VL+++ +   L  G+  A + L K    A+ C+ AE+   D
Sbjct: 9   PSAAPVLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKR--QAVLCILAES--FD 64

Query: 495 SATHMQDVLLQAFCVENDIHVIKVDCETKLRRMLGYC 605
              + +  L+ A C E+ I +I+VD   KL    G C
Sbjct: 65  EPNYKK--LVTALCNEHQIPLIRVDSHKKLGEWSGLC 99


>AE014296-2234|AAN11845.1|  139|Drosophila melanogaster CG11271-PB,
           isoform B protein.
          Length = 139

 Score = 36.3 bits (80), Expect = 0.057
 Identities = 27/97 (27%), Positives = 45/97 (46%)
 Frame = +3

Query: 315 PRTFSVIAAKSSIGQCIKTVLRRACVEKRLTIGLLPAIQYLSKNCNGALFCLTAEAPPGD 494
           P    V+     I   ++ VL+++ +   L  G+  A + L K    A+ C+ AE+   D
Sbjct: 9   PSAAPVLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKR--QAVLCILAES--FD 64

Query: 495 SATHMQDVLLQAFCVENDIHVIKVDCETKLRRMLGYC 605
              + +  L+ A C E+ I +I+VD   KL    G C
Sbjct: 65  EPNYKK--LVTALCNEHQIPLIRVDSHKKLGEWSGLC 99


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,541,789
Number of Sequences: 53049
Number of extensions: 668289
Number of successful extensions: 1399
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)