Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_G18
         (935 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    26   1.4  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   5.8  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    24   7.6  

>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 145 LGQLTYRDIVLYKINEYKYGFP 210
           L QLT +D+ LY I E    FP
Sbjct: 72  LSQLTAKDVTLYAIEEGSVAFP 93


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 126 PKPRPKSRPADLPRHR 173
           P+ RP S+P  LPR R
Sbjct: 289 PRSRPTSKPKRLPRRR 304


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = -3

Query: 342 AAGLDDRISAVAVCVV--ILHVYRGYVREVLLTGLRIFYL 229
           A+G +DR+  +A+C +  I    R  + EV+ T   ++YL
Sbjct: 89  ASGENDRVQVIALCSISKIPSCARRCLLEVIATQEYLYYL 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,444
Number of Sequences: 2352
Number of extensions: 9976
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102122397
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)