Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_G13
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0050 - 12819929-12820468,12820606-12820824,12820900-12821118     34   0.17 
10_08_0333 - 16850267-16851802                                         33   0.40 
10_08_0330 - 16816497-16819952                                         32   0.70 
01_01_0430 + 3258438-3259200,3259929-3261454                           29   4.9  

>11_04_0050 - 12819929-12820468,12820606-12820824,12820900-12821118
          Length = 325

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +1

Query: 181 KRCCSWNIQR*ALCRIMRSCAVIGKLPNTSSC 276
           +RCCSW I+    CR  + CA   KLP+ SSC
Sbjct: 287 RRCCSWKIKL-PKCRFPKCCAF--KLPSPSSC 315


>10_08_0333 - 16850267-16851802
          Length = 511

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -1

Query: 241 HKSALCGTMLNVECSNYSTASHNR 170
           H S LCG  LN+ C+N S AS  R
Sbjct: 418 HNSGLCGPPLNISCTNASVASDER 441


>10_08_0330 - 16816497-16819952
          Length = 1151

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 241  HKSALCGTMLNVECSNYSTASHNR 170
            + S LCG  LN+ C+NY+ AS  R
Sbjct: 1058 NNSGLCGLPLNISCTNYALASDER 1081


>01_01_0430 + 3258438-3259200,3259929-3261454
          Length = 762

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 235 SALCGTMLNVECSNYSTASHNRALSKVL 152
           + LCG  L+ ECSN ST+S  +++  +L
Sbjct: 709 AGLCGPPLSNECSNKSTSSEEKSVDVML 736


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,373,863
Number of Sequences: 37544
Number of extensions: 282023
Number of successful extensions: 458
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)