Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_G11
         (903 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067357-1|AAH67357.1|  600|Homo sapiens CKAP4 protein protein.        31   7.6  
AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.                 31   7.6  
AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.     31   7.6  
AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein.              31   7.6  
AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.     31   7.6  
BC080573-1|AAH80573.1|  360|Homo sapiens similar to RIKEN cDNA A...    30   10.0 

>BC067357-1|AAH67357.1|  600|Homo sapiens CKAP4 protein protein.
          Length = 600

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +1

Query: 64  RSGTVPGXPRATRPPQHVAGVAWARMRRPAASSDVARP 177
           R+ T P  PR   P +  A + W R RR   SS   RP
Sbjct: 33  RAATAPRAPRRRVPTRRAARMTWRRSRRRRRSSRRRRP 70


>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
          Length = 4911

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 58   GQRSGTVPGXPRATRPPQHVAGVAWARMRRPAASSDVARPLD 183
            G   GT+P   R   PPQ + G   +   R + S D+ RPL+
Sbjct: 2486 GGSHGTMPSQERFLVPPQQIQGSGVSPQLRRSVSVDMPRPLN 2527


>AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.
          Length = 4025

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 58   GQRSGTVPGXPRATRPPQHVAGVAWARMRRPAASSDVARPLD 183
            G   GT+P   R   PPQ + G   +   R + S D+ RPL+
Sbjct: 1547 GGSHGTMPSQERFLVPPQQIQGSGVSPQLRRSVSVDMPRPLN 1588


>AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein.
          Length = 2185

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 58   GQRSGTVPGXPRATRPPQHVAGVAWARMRRPAASSDVARPLD 183
            G   GT+P   R   PPQ + G   +   R + S D+ RPL+
Sbjct: 1547 GGSHGTMPSQERFLVPPQQIQGSGVSPQLRRSVSVDMPRPLN 1588


>AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.
          Length = 3310

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 58   GQRSGTVPGXPRATRPPQHVAGVAWARMRRPAASSDVARPLD 183
            G   GT+P   R   PPQ + G   +   R + S D+ RPL+
Sbjct: 1931 GGSHGTMPSQERFLVPPQQIQGSGVSPQLRRSVSVDMPRPLN 1972


>BC080573-1|AAH80573.1|  360|Homo sapiens similar to RIKEN cDNA
           A230078I05 gene protein.
          Length = 360

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -1

Query: 237 RVCLVASRRGESRX*XRPVQRP--SDVAGRRRPSHPGPRDPSH 115
           RV L+  R+ E R   R  +RP  + + G R P  PGP DP++
Sbjct: 256 RVQLMRIRQQEDRKEKRRKKRPPRAPLRGPRAPPRPGPPDPAY 298


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,168,805
Number of Sequences: 237096
Number of extensions: 1879477
Number of successful extensions: 8500
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8499
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)