Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_G10
         (927 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    27   0.61 
AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450 CY...    26   1.4  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   5.7  

>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 27.5 bits (58), Expect = 0.61
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +1

Query: 640 RASQKSTPQVXGGETRQDYKXTRRFPLETPSCALL 744
           R++Q+ TP+  GG+++Q  K  ++  L  P   ++
Sbjct: 141 RSAQRETPKSSGGQSKQPKKKKKKRSLPKPEAVVI 175


>AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450
           CYP4H24 protein.
          Length = 193

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 617 FHRLRPPDEHHKNRXLKSXVAKPDRTIXI 703
           F+R+ P D  H+ R     V +PD++I I
Sbjct: 159 FYRILPGDTMHEIRLKTDLVLRPDKSIPI 187


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 713 SPWKLPRALSCSXPXRLPEYLSAFLPSGSV 802
           S WK+ + +    P + P + SAF P G V
Sbjct: 508 SMWKIQKLVLIPKPGKPPGHPSAFRPLGLV 537


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,499
Number of Sequences: 2352
Number of extensions: 8892
Number of successful extensions: 57
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100882044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)