Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_G07
         (894 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   2.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.6  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   7.5  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   7.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   7.5  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
          protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 19 PWLTPFFY*YCREAFATHFL 78
          PW  P++Y Y + A   H L
Sbjct: 36 PWYNPYYYQYLQNAALYHKL 55


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 227 MRTQFLEDFLHQRRISSCQTASKCVLEKNVDSIYF 331
           M+ + ++ FLH  RI   Q+   C++  N    YF
Sbjct: 1   MQHEVVKKFLHSVRIVFVQSEIFCLVNFNHRESYF 35


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
 Frame = +2

Query: 50  VGKLLRHIF*IF*NFQRYE*ITLSL-----KMSNCLRSFSHKILPIN 175
           V + L+ I+ I  NF+ Y+  +L L     K +N +RSF+H   PI+
Sbjct: 51  VPEALKKIYNIQNNFE-YDTASLPLPGLYTKSANTIRSFTHVESPID 96


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 455 LLFNIIIASNTERLHFYSIINVS 387
           LLF +     T + H YS+I++S
Sbjct: 15  LLFYLFYCYKTIKQHIYSLISLS 37


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 455 LLFNIIIASNTERLHFYSIINVS 387
           LLF +     T + H YS+I++S
Sbjct: 15  LLFYLFYCYKTIKQHIYSLISLS 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,810
Number of Sequences: 336
Number of extensions: 4172
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)