Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_G07
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753...    33   0.31 
01_05_0099 - 18098169-18098390,18098878-18098972,18099063-180991...    30   2.9  
10_08_0355 - 17131178-17131268,17131376-17131429,17131521-171316...    29   6.6  
01_07_0357 + 43032552-43033034,43034054-43034383,43035210-430353...    29   6.6  

>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
            18577344-18577458,18578179-18578333,18578673-18580621,
            18580691-18581372,18581550-18581621,18582558-18583199,
            18583301-18583402,18585011-18585100
          Length = 2192

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 21/77 (27%), Positives = 37/77 (48%)
 Frame = +3

Query: 429  TCDDYIEQKLPHTNEVPNSRISDIDLGKYDNDLQPTCLSDFERNAVAYCSGSTPTEAQST 608
            TC    E     T+ +  S + D+D G   + ++ T   D +++ ++  SG+TPTE    
Sbjct: 2059 TCPSRPEPPETGTHRIEFSAVDDMDTGSCRSPVRDTPDPDNQKSELSG-SGNTPTELSVL 2117

Query: 609  PQANPDGKPSEEQLMKV 659
            P  +  G  SE  ++ V
Sbjct: 2118 PLVDAPGTSSEPAVVPV 2134


>01_05_0099 -
           18098169-18098390,18098878-18098972,18099063-18099131,
           18099277-18099352,18101412-18101524,18104137-18104185,
           18104540-18104572,18105446-18105552,18106892-18106990,
           18107122-18107203
          Length = 314

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 486 YCLVLHSCVVTFVQYNHRK 430
           YC ++ +C+VTF  YNH K
Sbjct: 99  YCFMIDACLVTFSVYNHLK 117


>10_08_0355 -
           17131178-17131268,17131376-17131429,17131521-17131663,
           17131812-17132096,17132168-17132301,17132383-17132556,
           17132639-17132707,17132814-17132878,17133441-17133589,
           17133747-17133989,17134119-17134255,17134340-17134561,
           17134661-17134827,17136680-17136819
          Length = 690

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 447 EQKLPHTNEVPNSRISDIDLGKYDNDLQ-PTCLSDFERNAVAY 572
           + KL     +PN+RI+D  LG YD+D+   TC    E   +++
Sbjct: 218 DDKLRVAVRLPNNRITDGFLGLYDHDIAIVTCFGLIEVRPISF 260


>01_07_0357 +
           43032552-43033034,43034054-43034383,43035210-43035325,
           43035589-43035679,43035790-43035860,43036202-43036258,
           43036809-43036860,43037139-43037170,43037686-43037753,
           43038148-43038353
          Length = 501

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 555 RNAVAYCSGSTPTEAQSTPQANPDGKPSEEQLMKVFHVLSE 677
           RN++A CS S   +   TP+A   G P      +  H L +
Sbjct: 35  RNSLAICSASASGDPSPTPEAEGGGNPLLALWRRTLHPLGD 75


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,971,329
Number of Sequences: 37544
Number of extensions: 408653
Number of successful extensions: 975
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)