Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_G05
         (902 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    33   0.54 
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    33   0.54 

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 33.1 bits (72), Expect = 0.54
 Identities = 23/96 (23%), Positives = 28/96 (29%), Gaps = 1/96 (1%)
 Frame = +3

Query: 405 PPXKXPPPXGXXGFFFXXXXXSPPXXPXAPGXXXXXXVXPPPKGGNXXSXKXGXXPXKNL 584
           P    PPP    G  +     +PP     P         P P  G     +    P    
Sbjct: 297 PEYGPPPPAPPAGPTYQPRPPAPPAPAPGPTYQPRPPAPPAPAPGPTYQPRPPSPPAPPA 356

Query: 585 LTKGPQXXRNPKXXPXXXFSPXXP-PPXKTXKKXXP 689
            T  PQ    P   P   + P  P PP  T +   P
Sbjct: 357 PTYQPQPPAPPAPAPGPTYQPRPPAPPAPTPEYGPP 392


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 33.1 bits (72), Expect = 0.54
 Identities = 23/96 (23%), Positives = 28/96 (29%), Gaps = 1/96 (1%)
 Frame = +3

Query: 405 PPXKXPPPXGXXGFFFXXXXXSPPXXPXAPGXXXXXXVXPPPKGGNXXSXKXGXXPXKNL 584
           P    PPP    G  +     +PP     P         P P  G     +    P    
Sbjct: 297 PEYGPPPPAPPAGPTYQPRPPAPPAPAPGPTYQPRPPAPPAPAPGPTYQPRPPSPPAPPA 356

Query: 585 LTKGPQXXRNPKXXPXXXFSPXXP-PPXKTXKKXXP 689
            T  PQ    P   P   + P  P PP  T +   P
Sbjct: 357 PTYQPQPPAPPAPAPGPTYQPRPPAPPAPTPEYGPP 392


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,992,071
Number of Sequences: 53049
Number of extensions: 284695
Number of successful extensions: 1174
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)