Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_G01
         (895 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    27   1.0  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       24   7.2  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    24   7.2  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    24   7.2  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     23   9.5  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 29/104 (27%), Positives = 49/104 (47%)
 Frame = -1

Query: 340 FPSSSLYAPTPRFTFLGCVSFLYASVMPKITSGGPI*TLFHQVLLALRPVQPTIVSTLLG 161
           F + +L  PT   +FL CV   Y   +P     G   TL   +LL+L  V   +VS +L 
Sbjct: 234 FYTVNLILPTVLISFL-CVLVFY---LP--AEAGEKVTLGISILLSL-VVFLLLVSKILP 286

Query: 160 LSTWVVNFFNT*AIFTKLSNTGKIITNYVVLLKDEECPKXLRIP 29
            ++ V+       +FT + NT  I+   +++  +   P+  R+P
Sbjct: 287 PTSLVLPLIAKYLLFTFIMNTVSILVTVIIINWNFRGPRTHRMP 330


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = +3

Query: 81  LVIILPVLDSFVKMAQVLKKLTTQVLK 161
           + +I+P   +  K+ Q++ KLT++V+K
Sbjct: 301 MYVIMPNNSNRAKLQQLIPKLTSEVVK 327


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -1

Query: 712 SSSAPCKSK-PLVLGSK*RYFLCGKLRVLQICGWFPQV 602
           SS  P K   P+  G+K     CG+   LQ CG   Q+
Sbjct: 188 SSVRPSKGLIPVAPGAKCPITTCGRNEALQACGTCNQI 225


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 837 IISFL*SPWKVVPSRWAWGQH 775
           I SF  +    +P+ W WG+H
Sbjct: 163 IFSFFNTIVYCIPAGWVWGEH 183


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 500 LYCTDTVRHWRSPPWTRVHNETLR 571
           +Y  D  +  RSPP  R+ N T+R
Sbjct: 42  MYLRDWRKALRSPPSYRIGNRTIR 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 965,128
Number of Sequences: 2352
Number of extensions: 22349
Number of successful extensions: 50
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)