Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_G01
(895 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical pr... 276 1e-74
U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical pr... 276 1e-74
AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical... 254 5e-68
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 173 2e-43
U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical pr... 88 9e-18
U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical pr... 66 4e-11
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 36 0.039
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 36 0.039
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 36 0.039
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 30 1.9
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 30 1.9
AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical... 29 5.9
>U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical
protein C14F11.1b protein.
Length = 297
Score = 276 bits (677), Expect = 1e-74
Identities = 129/218 (59%), Positives = 165/218 (75%)
Frame = +3
Query: 192 TGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKA 371
T +R S WW++V+MGPPD ILG+TEA+K D++PKK+NLGVGAYRDD+GKPFVLPSV++A
Sbjct: 10 TAVRGKS-WWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEA 68
Query: 372 EEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLE 551
E + + L+ EYA I G +T A+LA GE+S VIKNK T Q++SGTGALR+G E
Sbjct: 69 ERQVIAANLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSE 128
Query: 552 FITKHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALXDISKIPE 731
F++K YAK K I+ PTPTWGNH I + K+YRY+D T GFD GAL DI++IPE
Sbjct: 129 FLSK-YAKTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIAQIPE 187
Query: 732 GSIILLHACAHNPTGVDPKPNDWEQLSKVIKERKLFPF 845
GS ILLHACAHNPTGVDP + W+++S ++K+R LF F
Sbjct: 188 GSTILLHACAHNPTGVDPSRDQWKKISDIVKKRNLFVF 225
>U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical
protein C14F11.1a protein.
Length = 414
Score = 276 bits (677), Expect = 1e-74
Identities = 129/218 (59%), Positives = 165/218 (75%)
Frame = +3
Query: 192 TGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKA 371
T +R S WW++V+MGPPD ILG+TEA+K D++PKK+NLGVGAYRDD+GKPFVLPSV++A
Sbjct: 10 TAVRGKS-WWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEA 68
Query: 372 EEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLE 551
E + + L+ EYA I G +T A+LA GE+S VIKNK T Q++SGTGALR+G E
Sbjct: 69 ERQVIAANLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSE 128
Query: 552 FITKHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALXDISKIPE 731
F++K YAK K I+ PTPTWGNH I + K+YRY+D T GFD GAL DI++IPE
Sbjct: 129 FLSK-YAKTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIAQIPE 187
Query: 732 GSIILLHACAHNPTGVDPKPNDWEQLSKVIKERKLFPF 845
GS ILLHACAHNPTGVDP + W+++S ++K+R LF F
Sbjct: 188 GSTILLHACAHNPTGVDPSRDQWKKISDIVKKRNLFVF 225
>AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical
protein C44E4.3 protein.
Length = 419
Score = 254 bits (623), Expect = 5e-68
Identities = 114/210 (54%), Positives = 157/210 (74%)
Frame = +3
Query: 216 WWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRG 395
W+ NV + P D ILG+TEA+KKDT+P K+NLGVGAYRDD+GKPFVL +VR+AE+ +
Sbjct: 22 WFRNVPLAPADPILGVTEAFKKDTNPNKINLGVGAYRDDQGKPFVLRAVREAEQQIIDAK 81
Query: 396 LNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHYAK 575
++ EY+ I+G + AKLAFG++S VI++ T Q++SGTGALR+G +F+ K +
Sbjct: 82 MDKEYSTITGVPEFAPLAAKLAFGDNSEVIRDGRVFTTQSISGTGALRIGGQFVEK-FIP 140
Query: 576 AKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALXDISKIPEGSIILLHA 755
+K ++ PTPTW NH + L + YRY++ +T GFD++GAL DISK+PEGS+ILLHA
Sbjct: 141 SKTLFYPTPTWANHLPVFRNSGLSIQPYRYYNQETLGFDVEGALEDISKMPEGSVILLHA 200
Query: 756 CAHNPTGVDPKPNDWEQLSKVIKERKLFPF 845
CAHNPTGVDP W++LS+V+KERK+ PF
Sbjct: 201 CAHNPTGVDPTKEQWKKLSQVLKERKILPF 230
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 173 bits (420), Expect = 2e-43
Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 2/213 (0%)
Frame = +3
Query: 213 TWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHS 389
++++ + + PP + + Y +T P KVNL +GAYR +EG+P+VLP V + E EI +
Sbjct: 2 SFFDGIPVAPPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIAND 61
Query: 390 RGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHY 569
LNHEY P+ G + A +L G +SP IK + + VQ LSGTGALR G EF+
Sbjct: 62 TSLNHEYLPVLGHEGFRKAATELVLGAESPAIKEERSFGVQCLSGTGALRAGAEFLAS-V 120
Query: 570 AKAKEIWLPTPTWGNHPQICNTLNLPH-KKYRYFDPKTNGFDLQGALXDISKIPEGSIIL 746
K +++ PTWGNH + Y ++D ++ L D+ PE S+I+
Sbjct: 121 CNMKTVYVSNPTWGNHKLVFKKAGFTTVADYTFWDYDNKRVHIEKFLSDLESAPEKSVII 180
Query: 747 LHACAHNPTGVDPKPNDWEQLSKVIKERKLFPF 845
LH CAHNPTG+DP W+ +++VIK + LF F
Sbjct: 181 LHGCAHNPTGMDPTQEQWKLVAEVIKRKNLFTF 213
>U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical
protein T01C8.4 protein.
Length = 357
Score = 87.8 bits (208), Expect = 9e-18
Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Frame = +3
Query: 213 TWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHS 389
++++ + + P L +E ++K+ P K+NL + AYR ++G+P+VLP VR+ E + H
Sbjct: 4 SFFDGIHVASPIKELHTSELFQKEICPVKINLAIEAYRTEDGEPWVLPVVREIELKFPHE 63
Query: 390 RGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHY 569
NHEY PI G + + L G DS IK + +VQ +SGTGA+ +G EF+ +
Sbjct: 64 PHHNHEYLPILGHDGFCKSATALLLGNDSLAIKEGRSFSVQCISGTGAICVGAEFLAQ-V 122
Query: 570 AKAKEIWLPTP 602
K I++ P
Sbjct: 123 LSMKTIYVSNP 133
Score = 38.7 bits (86), Expect = 0.006
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 762 HNPTGVDPKPNDWEQLSKVIKERKLFPF 845
+NPTG+DP W Q+++VIK++ LF F
Sbjct: 138 YNPTGMDPTREQWIQMAQVIKQKNLFTF 165
>U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical
protein C14E2.2 protein.
Length = 364
Score = 65.7 bits (153), Expect = 4e-11
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +3
Query: 612 NHPQICNTLNLPH-KKYRYFDPKTNGFDLQGALXDISKIPEGSIILLHACAHNPTGVDPK 788
+H IC +Y +++ + D++ L D+ P S+I+L ACA+NPTG+D
Sbjct: 91 SHHLICKKAGFTTVAEYTFWNYEEKCVDIEKLLSDLEFAPAKSVIILPACAYNPTGMDLS 150
Query: 789 PNDWEQLSKVIKERKLFPF 845
N W+Q+++VIK ++LFPF
Sbjct: 151 ENQWKQIARVIKRKRLFPF 169
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 35.9 bits (79), Expect = 0.039
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = -1
Query: 532 APVPDSVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYS*LSPLLWRISSAFLTEG 353
+P+P S+ T L + + SSP A+ +T V ++S + + S P ++S+ T G
Sbjct: 34 SPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVASSPSTVG 91
Query: 352 KTNGFPSSSLYA 317
T+G SSS YA
Sbjct: 92 STSGAASSSSYA 103
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 35.9 bits (79), Expect = 0.039
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = -1
Query: 532 APVPDSVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYS*LSPLLWRISSAFLTEG 353
+P+P S+ T L + + SSP A+ +T V ++S + + S P ++S+ T G
Sbjct: 241 SPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVASSPSTVG 298
Query: 352 KTNGFPSSSLYA 317
T+G SSS YA
Sbjct: 299 STSGAASSSSYA 310
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 35.9 bits (79), Expect = 0.039
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = -1
Query: 532 APVPDSVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYS*LSPLLWRISSAFLTEG 353
+P+P S+ T L + + SSP A+ +T V ++S + + S P ++S+ T G
Sbjct: 241 SPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVASSPSTVG 298
Query: 352 KTNGFPSSSLYA 317
T+G SSS YA
Sbjct: 299 STSGAASSSSYA 310
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class
glutamate receptor protein1 protein.
Length = 1025
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -1
Query: 781 STPVGL---CAHACNRIMEPSGIFD-ISSSAPCKSKPLVLGSK*RYFLCGKLRV 632
+TP+G CA N ++E S IFD I S P S PL L + YF C L +
Sbjct: 410 TTPIGSPSQCAELGNTVVEWS-IFDKIVVSGPWYSCPLTLENSTEYFCCAGLAI 462
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -1
Query: 781 STPVGL---CAHACNRIMEPSGIFD-ISSSAPCKSKPLVLGSK*RYFLCGKLRV 632
+TP+G CA N ++E S IFD I S P S PL L + YF C L +
Sbjct: 410 TTPIGSPSQCAELGNTVVEWS-IFDKIVVSGPWYSCPLTLENSTEYFCCAGLAI 462
>AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical
protein Y51A2D.18 protein.
Length = 550
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -3
Query: 455 FSYSISICGLTTDGSILMIESSTMENFFCLSDRRQNKWFSLIISICSNTKIYFF 294
F+ S +I G T GSI +I MEN ++ W ++ I+ N IY +
Sbjct: 182 FTISRTIVGFFTGGSISIINVFIMENI----PKKHRMWINMAITWSPNMPIYSY 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,132,746
Number of Sequences: 27780
Number of extensions: 490484
Number of successful extensions: 1331
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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