Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_F24
         (895 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   1.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   1.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   1.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   7.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   7.5  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   7.5  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   7.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.9  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 290 STAPPEDALGNRFGDD 337
           +T+PP   L NRFG++
Sbjct: 131 NTSPPSPILSNRFGEN 146


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = -2

Query: 219 IIATQRTVIFMMLIVYRRKFYKNNNHEILTANLWKSIEL-----ISKIH 88
           I AT   ++ +ML ++RR    NN   I+    W S+ +     IS+IH
Sbjct: 165 ISATVCFMMLLMLEIWRRFTILNNYLTIVLGETWTSLSVYHLVEISEIH 213


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = -2

Query: 219 IIATQRTVIFMMLIVYRRKFYKNNNHEILTANLWKSIEL-----ISKIH 88
           I AT   ++ +ML ++RR    NN   I+    W S+ +     IS+IH
Sbjct: 161 ISATVCFMMLLMLEIWRRFTILNNYLTIVLGETWTSLSVYHLVEISEIH 209


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 607 CFFKAEYMSWFKNXQKISVSF 669
           C F  + +  FKN +++ V+F
Sbjct: 108 CIFALKVIEVFKNIEEVDVAF 128


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 607 CFFKAEYMSWFKNXQKISVSF 669
           C F  + +  FKN +++ V+F
Sbjct: 108 CIFALKVIEVFKNIEEVDVAF 128


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 478 WILPVGFQSQPVEEP 434
           WI    +QSQP  EP
Sbjct: 126 WIKKTSYQSQPNPEP 140


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 478 WILPVGFQSQPVEEP 434
           WI    +QSQP  EP
Sbjct: 126 WIKKTSYQSQPNPEP 140


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 413 PVDKQPFWLLNWLALEANRKNPQNF 487
           P  + P W + WL  +  R  P NF
Sbjct: 13  PPQEMPTWFVRWLNSQQPRNVP-NF 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,878
Number of Sequences: 336
Number of extensions: 3452
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)